RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
TCF3-219ENST00000610756 DBNDD2Q9BQY9 259 aa23.71■■□□□ 1.39
TCF3-219ENST00000610756 HMMRO75330 724 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 MCAMP43121 646 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 DZIP1Q86YF9 867 aaKnown RBP23.7■■□□□ 1.38
TCF3-219ENST00000610756 CDAN1Q8IWY9 1227 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 EAF2Q96CJ1 260 aaPredicted RBP23.7■■□□□ 1.38
TCF3-219ENST00000610756 USP40Q9NVE5 1235 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 SAGE1Q9NXZ1 904 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 EXOC6BQ9Y2D4 811 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 GAKO14976 1311 aa23.7■■□□□ 1.38
TCF3-219ENST00000610756 TM4SF4P48230 202 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 TTC39AQ5SRH9 613 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 SPRYD7Q5W111 196 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 PI16Q6UXB8 463 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 ANKRD13AQ8IZ07 590 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 TNS4Q8IZW8 715 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 FAM151AQ8WW52 585 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 HOOK2Q96ED9 719 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 RNF186Q9NXI6 227 aa23.69■■□□□ 1.38
TCF3-219ENST00000610756 MECOMQ03112 1051 aa23.68■■□□□ 1.38
TCF3-219ENST00000610756 TBC1D9Q6ZT07 1266 aa23.68■■□□□ 1.38
TCF3-219ENST00000610756 CLMNQ96JQ2 1002 aa23.68■■□□□ 1.38
TCF3-219ENST00000610756 TSKSQ9UJT2 592 aa23.68■■□□□ 1.38
TCF3-219ENST00000610756 DBNLQ9UJU6 430 aaKnown RBP23.68■■□□□ 1.38
TCF3-219ENST00000610756 CCDC8Q9H0W5 538 aaPredicted RBP23.67■■□□□ 1.38
TCF3-219ENST00000610756 MYH13Q9UKX3 1938 aa23.66■■□□□ 1.38
TCF3-219ENST00000610756 TRPA1O75762 1119 aa23.66■■□□□ 1.38
TCF3-219ENST00000610756 ZBTB48P10074 688 aaPredicted RBP23.66■■□□□ 1.38
TCF3-219ENST00000610756 ZNF384Q8TF68 577 aa23.66■■□□□ 1.38
TCF3-219ENST00000610756 NSUN4Q96CB9 384 aaKnown RBP23.66■■□□□ 1.38
TCF3-219ENST00000610756 GPR75-ASB3A0A0A6YYF3 556 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 LDHCP07864 332 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 INHBEP58166 350 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 GSTO1P78417 241 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 MAP3K9P80192 1104 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 NFIAQ12857 509 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 RHPN1Q8TCX5 695 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 IDI2Q9BXS1 227 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 LRP2BPQ9P2M1 347 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 FAM198AQ9UFP1 575 aa23.65■■□□□ 1.38
TCF3-219ENST00000610756 IGSF3O75054 1194 aa23.64■■□□□ 1.38
TCF3-219ENST00000610756 SREBF2Q12772 1141 aa23.64■■□□□ 1.38
TCF3-219ENST00000610756 MKRN3Q13064 507 aaKnown RBP23.64■■□□□ 1.38
TCF3-219ENST00000610756 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.64■■□□□ 1.38
TCF3-219ENST00000610756 SNRKQ9NRH2 765 aa23.64■■□□□ 1.38
TCF3-219ENST00000610756 TLR7Q9NYK1 1049 aaKnown RBP23.64■■□□□ 1.38
TCF3-219ENST00000610756 RAI14Q9P0K7 980 aa23.64■■□□□ 1.38
TCF3-219ENST00000610756 MROH7-TTC4A0A0A0MT08 1334 aa23.64■■□□□ 1.37
TCF3-219ENST00000610756 RPAP1Q9BWH6 1393 aaPredicted RBP23.64■■□□□ 1.37
TCF3-219ENST00000610756 RAB11FIP3O75154 756 aa23.63■■□□□ 1.37
TCF3-219ENST00000610756 TCP10Q12799 353 aa23.63■■□□□ 1.37
TCF3-219ENST00000610756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.63■■□□□ 1.372e-6■■□□□ 12.2
TCF3-219ENST00000610756 KIF1BPQ96EK5 621 aa23.63■■□□□ 1.37
TCF3-219ENST00000610756 WNK4Q96J92 1243 aa23.63■■□□□ 1.37
TCF3-219ENST00000610756 MANSC4A6NHS7 340 aaPredicted RBP23.62■■□□□ 1.37
TCF3-219ENST00000610756 ENTPD3O75355 529 aa23.62■■□□□ 1.37
TCF3-219ENST00000610756 MAP4K4O95819 1239 aaPredicted RBP23.62■■□□□ 1.37
TCF3-219ENST00000610756 CYP2E1P05181 493 aaPredicted RBP23.62■■□□□ 1.37
TCF3-219ENST00000610756 BTDP43251 543 aa23.62■■□□□ 1.37
TCF3-219ENST00000610756 DCAF15Q66K64 600 aa23.62■■□□□ 1.37
TCF3-219ENST00000610756 AACSQ86V21 672 aa23.62■■□□□ 1.37
TCF3-219ENST00000610756 CLASRPQ8N2M8 674 aaKnown RBP23.61■■□□□ 1.37
TCF3-219ENST00000610756 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.61■■□□□ 1.37
TCF3-219ENST00000610756 ZAP70P43403 619 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 RHBDL3P58872 404 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 ZFPM1Q8IX07 1006 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 YTHDC1Q96MU7 727 aaKnown RBP23.6■■□□□ 1.37
TCF3-219ENST00000610756 ELP3Q9H9T3 547 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 CSADQ9Y600 493 aa23.6■■□□□ 1.37
TCF3-219ENST00000610756 NPM3O75607 178 aaKnown RBP23.59■■□□□ 1.37
TCF3-219ENST00000610756 WDHD1O75717 1129 aaPredicted RBP23.59■■□□□ 1.37
TCF3-219ENST00000610756 RGS3P49796 1198 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 VGLL4Q14135 290 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 ZNF341Q9BYN7 854 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 GJA5P36382 358 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 OPTNQ96CV9 577 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 ZNF112Q9UJU3 913 aa23.59■■□□□ 1.37
TCF3-219ENST00000610756 APBB1O00213 710 aa23.58■■□□□ 1.36
TCF3-219ENST00000610756 ALDH1A1P00352 501 aa23.58■■□□□ 1.36
TCF3-219ENST00000610756 NAA16Q6N069 864 aaPredicted RBP23.58■■□□□ 1.36
TCF3-219ENST00000610756 WRNIP1Q96S55 665 aa23.58■■□□□ 1.36
TCF3-219ENST00000610756 CFHR5Q9BXR6 569 aa23.58■■□□□ 1.36
TCF3-219ENST00000610756 TESPA1A2RU30 521 aaPredicted RBP23.57■■□□□ 1.36
TCF3-219ENST00000610756 MAP3K10Q02779 954 aa23.57■■□□□ 1.36
TCF3-219ENST00000610756 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
TCF3-219ENST00000610756 ZKSCAN4Q969J2 545 aaPredicted RBP23.57■■□□□ 1.36
TCF3-219ENST00000610756 DDX4Q9NQI0 724 aaKnown RBP23.57■■□□□ 1.36
TCF3-219ENST00000610756 PIH1D3Q9NQM4 214 aaKnown RBP23.57■■□□□ 1.36
TCF3-219ENST00000610756 RFX7Q2KHR2 1363 aa23.57■■□□□ 1.36
TCF3-219ENST00000610756 BAG3O95817 575 aa23.56■■□□□ 1.36
TCF3-219ENST00000610756 RRP1P56182 461 aaKnown RBP23.56■■□□□ 1.36
TCF3-219ENST00000610756 PPP4CP60510 307 aa23.56■■□□□ 1.36
TCF3-219ENST00000610756 SH3BP5LQ7L8J4 393 aa23.56■■□□□ 1.36
TCF3-219ENST00000610756 MYH2Q9UKX2 1941 aa23.56■■□□□ 1.36
TCF3-219ENST00000610756 SPDYE5A6NIY4 337 aa23.55■■□□□ 1.36
TCF3-219ENST00000610756 TBC1D8O95759 1140 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms