RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
CTSA-210ENST00000606000 CASP8AP2Q9UKL3 1982 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 ZBTB22O15209 634 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 GJA5P36382 358 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 TCP10Q12799 353 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 SPRYD7Q5W111 196 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 DZIP1Q86YF9 867 aaKnown RBP15.15■□□□□ 0.02
CTSA-210ENST00000606000 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 TMOD2Q9NZR1 351 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 GAKO14976 1311 aa15.15■□□□□ 0.02
CTSA-210ENST00000606000 CA12O43570 354 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 IREB2P48200 963 aaKnown RBP15.14■□□□□ 0.01
CTSA-210ENST00000606000 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
CTSA-210ENST00000606000 CCDC8Q9H0W5 538 aaPredicted RBP15.14■□□□□ 0.01
CTSA-210ENST00000606000 ELP3Q9H9T3 547 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 GPR108Q9NPR9 543 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 ZBTB40Q9NUA8 1239 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 DBNLQ9UJU6 430 aaKnown RBP15.14■□□□□ 0.01
CTSA-210ENST00000606000 DDX19BQ9UMR2 479 aa15.14■□□□□ 0.01
CTSA-210ENST00000606000 RFX7Q2KHR2 1363 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
CTSA-210ENST00000606000 MS4A1P11836 297 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 MECOMQ03112 1051 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 TTC39AQ5SRH9 613 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
CTSA-210ENST00000606000 FAM83AQ86UY5 434 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
CTSA-210ENST00000606000 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
CTSA-210ENST00000606000 SLC10A4Q96EP9 437 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 SAGE1Q9NXZ1 904 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
CTSA-210ENST00000606000 APBB1O00213 710 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 BTDP43251 543 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 VGLL4Q14135 290 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 ANKRD13AQ8IZ07 590 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.12■□□□□ 0.011e-21■■■□□ 15.8
CTSA-210ENST00000606000 MROH7-TTC4A0A0A0MT08 1334 aa15.12■□□□□ 0.01
CTSA-210ENST00000606000 AK9Q5TCS8 1911 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 TBC1D8O95759 1140 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 UQCRFS1P1P0C7P4 283 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 SLURP2P0DP57 97 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 FKBP1CQ5VVH2 108 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 MIGA2Q7L4E1 593 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 OPTNQ96CV9 577 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
CTSA-210ENST00000606000 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 ZAP70P43403 619 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 TM4SF4P48230 202 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 RGS3P49796 1198 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
CTSA-210ENST00000606000 FAM151AQ8WW52 585 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
CTSA-210ENST00000606000 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
CTSA-210ENST00000606000 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 DDX4Q9NQI0 724 aaKnown RBP15.1■□□□□ 0.01
CTSA-210ENST00000606000 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 SNCAIPQ9Y6H5 919 aa15.1■□□□□ 0.01
CTSA-210ENST00000606000 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTSA-210ENST00000606000 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
CTSA-210ENST00000606000 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
CTSA-210ENST00000606000 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
CTSA-210ENST00000606000 RHBDL3P58872 404 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 MAP3K9P80192 1104 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 SREBF2Q12772 1141 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 PICALMQ13492 652 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 CCDC158Q5M9N0 1113 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 SH3BP5LQ7L8J4 393 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 AACSQ86V21 672 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
CTSA-210ENST00000606000 RHPN1Q8TCX5 695 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 PIH1D3Q9NQM4 214 aaKnown RBP15.09■□□□□ 0.01
CTSA-210ENST00000606000 ATRNL1Q5VV63 1379 aa15.09■□□□□ 0.01
CTSA-210ENST00000606000 INPP5BP32019 993 aa15.08■□□□□ 0
CTSA-210ENST00000606000 PDE3AQ14432 1141 aa15.08■□□□□ 0
CTSA-210ENST00000606000 ADGRA1Q86SQ6 560 aa15.08■□□□□ 0
CTSA-210ENST00000606000 RPAP2Q8IXW5 612 aaPredicted RBP15.08■□□□□ 0
CTSA-210ENST00000606000 OTUD5Q96G74 571 aa15.08■□□□□ 0
CTSA-210ENST00000606000 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0
CTSA-210ENST00000606000 IDI2Q9BXS1 227 aa15.08■□□□□ 0
CTSA-210ENST00000606000 LRP2BPQ9P2M1 347 aa15.08■□□□□ 0
CTSA-210ENST00000606000 GPR75-ASB3A0A0A6YYF3 556 aa15.07■□□□□ 0
CTSA-210ENST00000606000 DDTLA6NHG4 134 aaPredicted RBP15.07■□□□□ 0
CTSA-210ENST00000606000 MANSC4A6NHS7 340 aaPredicted RBP15.07■□□□□ 0
CTSA-210ENST00000606000 UNCXA6NJT0 531 aa15.07■□□□□ 0
CTSA-210ENST00000606000 IFNL1Q8IU54 200 aa15.07■□□□□ 0
CTSA-210ENST00000606000 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
CTSA-210ENST00000606000 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
CTSA-210ENST00000606000 MCOLN1Q9GZU1 580 aa15.07■□□□□ 0
CTSA-210ENST00000606000 CSADQ9Y600 493 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms