RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 PANK3Q9H999 370 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
FARP1-241ENST00000602272 AFF2P51816 1311 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 COL18A1P39060 1754 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 ABCC6O95255 1503 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 FYB1O15117 783 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
FARP1-241ENST00000602272 ALDH16A1Q8IZ83 802 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 NGLY1Q96IV0 654 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 PLVAPQ9BX97 442 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
FARP1-241ENST00000602272 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
FARP1-241ENST00000602272 SEPT3Q9UH03 358 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
FARP1-241ENST00000602272 PRDM11Q9NQV5 511 aa9.32□□□□□ -0.92
FARP1-241ENST00000602272 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 FAM83GA6ND36 823 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 CHRNA4P43681 627 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 ZC3H6P61129 1189 aaKnown RBP9.31□□□□□ -0.92
FARP1-241ENST00000602272 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 ZNF772Q68DY9 489 aaPredicted RBP9.31□□□□□ -0.92
FARP1-241ENST00000602272 TRIM11Q96F44 468 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 COG3Q96JB2 828 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 GGNBP2Q9H3C7 697 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 NSD2O96028 1365 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 CAMTA1Q9Y6Y1 1673 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 ATRNO75882 1429 aa9.31□□□□□ -0.92
FARP1-241ENST00000602272 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 NAA30Q147X3 362 aaPredicted RBP9.3□□□□□ -0.92
FARP1-241ENST00000602272 CHRNA2Q15822 529 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 RTN1Q16799 776 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 MYO19Q96H55 970 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 SAP130Q9H0E3 1048 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 USP21Q9UK80 565 aa9.3□□□□□ -0.92
FARP1-241ENST00000602272 GLI3P10071 1580 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 COL5A2P05997 1499 aaPredicted RBP9.29□□□□□ -0.92
FARP1-241ENST00000602272 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
FARP1-241ENST00000602272 HIF1AQ16665 826 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 COX20Q5RI15 118 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 UNC5CLQ8IV45 518 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 MDFIQ99750 246 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 PRDM6Q9NQX0 595 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
FARP1-241ENST00000602272 BTG4Q9NY30 223 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
FARP1-241ENST00000602272 PEAK1Q9H792 1746 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 GATA4P43694 442 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 KCNQ4P56696 695 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 XP32Q5T750 250 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
FARP1-241ENST00000602272 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
FARP1-241ENST00000602272 FAM208AQ9UK61 1670 aaKnown RBP9.28□□□□□ -0.92
FARP1-241ENST00000602272 RTL1A6NKG5 1358 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 WNK3Q9BYP7 1800 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 ZBTB7CA1YPR0 619 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 KCNA1Q09470 495 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
FARP1-241ENST00000602272 C16orf46Q6P387 395 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 AEBP1Q8IUX7 1158 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 GNEQ9Y223 722 aaKnown RBP9.27□□□□□ -0.93
FARP1-241ENST00000602272 BLMP54132 1417 aaPredicted RBP9.27□□□□□ -0.93
FARP1-241ENST00000602272 MAP3K19Q56UN5 1328 aa9.27□□□□□ -0.93
FARP1-241ENST00000602272 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
FARP1-241ENST00000602272 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 APBA3O96018 575 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 SERPINB4P48594 390 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 VPS72Q15906 364 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
FARP1-241ENST00000602272 NACC1Q96RE7 527 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 EFCC1Q9HA90 598 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 KLK14Q9P0G3 267 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 KCNH4Q9UQ05 1017 aa9.26□□□□□ -0.93
FARP1-241ENST00000602272 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
FARP1-241ENST00000602272 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 CRB1P82279 1406 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 SMG6Q86US8 1419 aaKnown RBP9.25□□□□□ -0.93
FARP1-241ENST00000602272 M0R082 166 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 TNFRSF10BO14763 440 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 FBLN1P23142 703 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 RBM6P78332 1123 aaKnown RBP9.25□□□□□ -0.93
FARP1-241ENST00000602272 DGKZQ13574 1117 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 RRS1Q15050 365 aaKnown RBP9.25□□□□□ -0.93
FARP1-241ENST00000602272 ZNF417Q8TAU3 575 aa9.25□□□□□ -0.93
FARP1-241ENST00000602272 ZNF587Q96SQ5 575 aaPredicted RBP9.25□□□□□ -0.93
FARP1-241ENST00000602272 SLC30A3Q99726 388 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms