RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
SSBP4-212ENST00000601919 SLC4A4Q9Y6R1 1079 aa22.2■■□□□ 1.14
SSBP4-212ENST00000601919 PRELPP51888 382 aa22.19■■□□□ 1.14
SSBP4-212ENST00000601919 ANAPC15P60006 121 aa22.19■■□□□ 1.14
SSBP4-212ENST00000601919 DAGLAQ9Y4D2 1042 aa22.19■■□□□ 1.14
SSBP4-212ENST00000601919 ZMYM6O95789 1325 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
SSBP4-212ENST00000601919 BTDP43251 543 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 CRKP46108 304 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 SCNN1DP51172 638 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 ALX1Q15699 326 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 VPS53Q5VIR6 699 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 GIMAP6Q6P9H5 292 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 ZDHHC15Q96MV8 337 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 GMLQ99445 158 aa22.18■■□□□ 1.14
SSBP4-212ENST00000601919 DYNLL1P63167 89 aaKnown RBP22.17■■□□□ 1.14
SSBP4-212ENST00000601919 NECTIN1Q15223 517 aa22.17■■□□□ 1.14
SSBP4-212ENST00000601919 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
SSBP4-212ENST00000601919 RNF181Q9P0P0 153 aa22.17■■□□□ 1.14
SSBP4-212ENST00000601919 USP17L8P0C7I0 530 aa22.16■■□□□ 1.14
SSBP4-212ENST00000601919 RBM5P52756 815 aaKnown RBP eCLIP22.16■■□□□ 1.14
SSBP4-212ENST00000601919 NAPBQ9H115 298 aa22.16■■□□□ 1.14
SSBP4-212ENST00000601919 TIAM2Q8IVF5 1701 aa22.16■■□□□ 1.14
SSBP4-212ENST00000601919 GSG1L2A8MUP6 293 aa22.15■■□□□ 1.14
SSBP4-212ENST00000601919 TDO2P48775 406 aa22.15■■□□□ 1.14
SSBP4-212ENST00000601919 IMMTQ16891 758 aaKnown RBP22.15■■□□□ 1.14
SSBP4-212ENST00000601919 CREB3L3Q68CJ9 461 aa22.15■■□□□ 1.14
SSBP4-212ENST00000601919 IFNL3Q8IZI9 196 aa22.15■■□□□ 1.14
SSBP4-212ENST00000601919 RBM19Q9Y4C8 960 aaKnown RBP22.15■■□□□ 1.14
SSBP4-212ENST00000601919 FGAP02671 866 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 USP5P45974 858 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 IL27Q8NEV9 243 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 SH3RF3Q8TEJ3 882 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-212ENST00000601919 DPF2Q92785 391 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 KCNB2Q92953 911 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 ZBTB12Q9Y330 459 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-212ENST00000601919 GJA3Q9Y6H8 435 aa22.14■■□□□ 1.13
SSBP4-212ENST00000601919 ZC3H4Q9UPT8 1303 aaKnown RBP22.13■■□□□ 1.13
SSBP4-212ENST00000601919 DCAF8L1A6NGE4 600 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 SLC27A2O14975 620 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 PRKAB2O43741 272 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 KRT32Q14532 448 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 C9orf131Q5VYM1 1079 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 TEX11Q8IYF3 940 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 GPC2Q8N158 579 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 ECM29Q5VYK3 1845 aa22.13■■□□□ 1.13
SSBP4-212ENST00000601919 CDK5RAP2Q96SN8 1893 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 ZNF213O14771 459 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 FOXP2O15409 715 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
SSBP4-212ENST00000601919 TSGA10IPQ3SY00 556 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 CFAP100Q494V2 611 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 APOBEC3HQ6NTF7 200 aaKnown RBP22.12■■□□□ 1.13
SSBP4-212ENST00000601919 AMOTL1Q8IY63 956 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 SDR42E1Q8WUS8 393 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 IL17RAQ96F46 866 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 USP40Q9NVE5 1235 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 FOCADQ5VW36 1801 aa22.12■■□□□ 1.13
SSBP4-212ENST00000601919 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
SSBP4-212ENST00000601919 DLGAP5Q15398 846 aa22.11■■□□□ 1.13
SSBP4-212ENST00000601919 MTMR14Q8NCE2 650 aa22.11■■□□□ 1.13
SSBP4-212ENST00000601919 SNX14Q9Y5W7 946 aa22.11■■□□□ 1.13
SSBP4-212ENST00000601919 ADAMTSL1Q8N6G6 1762 aa22.11■■□□□ 1.13
SSBP4-212ENST00000601919 PSMA5P28066 241 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 GMPSP49915 693 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-212ENST00000601919 RHBDL3P58872 404 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 RABEP1Q15276 862 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 NAV1Q8NEY1 1877 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 TGFBRAP1Q8WUH2 860 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 EPB41L4AQ9HCS5 686 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-212ENST00000601919 DCP1AQ9NPI6 582 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-212ENST00000601919 PALD1Q9ULE6 856 aa22.1■■□□□ 1.13
SSBP4-212ENST00000601919 BAZ2AQ9UIF9 1905 aaKnown RBP22.1■■□□□ 1.13
SSBP4-212ENST00000601919 ZNF280AP59817 542 aaPredicted RBP22.09■■□□□ 1.13
SSBP4-212ENST00000601919 CDC42EP5Q6NZY7 148 aa22.09■■□□□ 1.13
SSBP4-212ENST00000601919 TMOD2Q9NZR1 351 aa22.09■■□□□ 1.13
SSBP4-212ENST00000601919 ARPP21Q9UBL0 812 aaPredicted RBP22.09■■□□□ 1.13
SSBP4-212ENST00000601919 SPDYE2BA6NHP3 402 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 H7C1D1 291 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 MYO1BO43795 1136 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 CYP21A2P08686 494 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 SPDYE6P0CI01 402 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 DPY19L2Q6NUT2 758 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 RASEFQ8IZ41 740 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 TM6SF1Q9BZW5 370 aa22.08■■□□□ 1.13
SSBP4-212ENST00000601919 CNOT7Q9UIV1 285 aaKnown RBP22.08■■□□□ 1.13
SSBP4-212ENST00000601919 LAMB1P07942 1786 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 NPM3O75607 178 aaKnown RBP22.07■■□□□ 1.12
SSBP4-212ENST00000601919 SLC3A2P08195 630 aaKnown RBP22.07■■□□□ 1.12
SSBP4-212ENST00000601919 SBK1Q52WX2 424 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 MICALL2Q8IY33 904 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 KIF2CQ99661 725 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 MYOZ2Q9NPC6 264 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 MYH1P12882 1939 aa22.07■■□□□ 1.12
SSBP4-212ENST00000601919 PRMT6Q96LA8 375 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-212ENST00000601919 RNF41Q9H4P4 317 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-212ENST00000601919 MKRN1Q9UHC7 482 aaKnown RBP22.06■■□□□ 1.12
SSBP4-212ENST00000601919 FLT1P17948 1338 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms