RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 DHX32Q7L7V1 743 aaKnown RBP16.26■□□□□ 0.19
IRF3-229ENST00000601373 ADGRA1Q86SQ6 560 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 JMYQ8N9B5 988 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 ZNF384Q8TF68 577 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
IRF3-229ENST00000601373 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
IRF3-229ENST00000601373 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
IRF3-229ENST00000601373 BAG3O95817 575 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 PPP4CP60510 307 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 GTF2IP78347 998 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 CUL4AQ13619 759 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 MFSD14BQ5SR56 506 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 FAM163AQ96GL9 167 aaPredicted RBP16.25■□□□□ 0.19
IRF3-229ENST00000601373 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
IRF3-229ENST00000601373 CRNKL1Q9BZJ0 848 aaKnown RBP16.25■□□□□ 0.19
IRF3-229ENST00000601373 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
IRF3-229ENST00000601373 NMRK2Q9NPI5 230 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
IRF3-229ENST00000601373 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
IRF3-229ENST00000601373 C21orf2O43822 256 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 CPA1P15085 419 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 TDO2P48775 406 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
IRF3-229ENST00000601373 TRDNQ13061 729 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 NCOA7Q8NI08 942 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 PSMD1Q99460 953 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 SLKQ9H2G2 1235 aaPredicted RBP16.24■□□□□ 0.19
IRF3-229ENST00000601373 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
IRF3-229ENST00000601373 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
IRF3-229ENST00000601373 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 PRKAB2O43741 272 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 HAND2P61296 217 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 KIAA2012Q0VF49 1180 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 DOK7Q18PE1 504 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
IRF3-229ENST00000601373 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
IRF3-229ENST00000601373 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
IRF3-229ENST00000601373 PLCG2P16885 1265 aa16.22■□□□□ 0.19
IRF3-229ENST00000601373 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
IRF3-229ENST00000601373 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
IRF3-229ENST00000601373 STRIP1Q5VSL9 837 aa16.22■□□□□ 0.19
IRF3-229ENST00000601373 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
IRF3-229ENST00000601373 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
IRF3-229ENST00000601373 AATFQ9NY61 560 aaKnown RBP eCLIP16.22■□□□□ 0.19
IRF3-229ENST00000601373 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 GPR75-ASB3A0A0A6YYF3 556 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 MCM5P33992 734 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 DDIT3P35638 169 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 FGD1P98174 961 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
IRF3-229ENST00000601373 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
IRF3-229ENST00000601373 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 CHMP4CQ96CF2 233 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
IRF3-229ENST00000601373 CNNM2Q9H8M5 875 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
IRF3-229ENST00000601373 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 ECE2O60344 883 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
IRF3-229ENST00000601373 GRIK5Q16478 980 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 Q6ZUG5 572 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 SDR42E1Q8WUS8 393 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 MRIQ9BWK5 157 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 KRT23Q9C075 422 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
IRF3-229ENST00000601373 GAKO14976 1311 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
IRF3-229ENST00000601373 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
IRF3-229ENST00000601373 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 SBK1Q52WX2 424 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 MFSD6Q6ZSS7 791 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
IRF3-229ENST00000601373 STAG1Q8WVM7 1258 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
IRF3-229ENST00000601373 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
IRF3-229ENST00000601373 MYH2Q9UKX2 1941 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 USP17L3A6NCW0 530 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
IRF3-229ENST00000601373 KCNA4P22459 653 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 BTDP43251 543 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 NT5C2P49902 561 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 PPARAQ07869 468 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 AOC3Q16853 763 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 USP17L1Q7RTZ2 530 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
IRF3-229ENST00000601373 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms