RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GPC2Q8N158 579 aa27.52■■■□□ 2
IRF3-227ENST00000600911 PRMT6Q96LA8 375 aaPredicted RBP27.52■■■□□ 2
IRF3-227ENST00000600911 SERPINA10Q9UK55 444 aa27.52■■■□□ 2
IRF3-227ENST00000600911 NAV1Q8NEY1 1877 aa27.52■■■□□ 2
IRF3-227ENST00000600911 HDLBPQ00341 1268 aaKnown RBP27.52■■■□□ 2
IRF3-227ENST00000600911 MICALL2Q8IY33 904 aa27.52■■■□□ 2
IRF3-227ENST00000600911 ZDHHC15Q96MV8 337 aa27.52■■■□□ 2
IRF3-227ENST00000600911 DDX60LQ5H9U9 1706 aaKnown RBP27.51■■□□□ 1.99
IRF3-227ENST00000600911 GSG1L2A8MUP6 293 aa27.51■■□□□ 1.99
IRF3-227ENST00000600911 MRIQ9BWK5 157 aa27.51■■□□□ 1.99
IRF3-227ENST00000600911 RPS12P25398 132 aaKnown RBP27.5■■□□□ 1.99
IRF3-227ENST00000600911 RBM5P52756 815 aaKnown RBP eCLIP27.5■■□□□ 1.99
IRF3-227ENST00000600911 ZNF280AP59817 542 aaPredicted RBP27.5■■□□□ 1.99
IRF3-227ENST00000600911 CDC42EP5Q6NZY7 148 aa27.5■■□□□ 1.99
IRF3-227ENST00000600911 DPF2Q92785 391 aa27.5■■□□□ 1.99
IRF3-227ENST00000600911 CNOT7Q9UIV1 285 aaKnown RBP27.5■■□□□ 1.99
IRF3-227ENST00000600911 SLC4A4Q9Y6R1 1079 aa27.5■■□□□ 1.99
IRF3-227ENST00000600911 SMIM22K7EJ46 135 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 EVX2Q03828 476 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 TMED8Q6PL24 325 aaPredicted RBP27.49■■□□□ 1.99
IRF3-227ENST00000600911 SAMD7Q7Z3H4 446 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 MAP4K1Q92918 833 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 ZBED3Q96IU2 234 aaPredicted RBP27.49■■□□□ 1.99
IRF3-227ENST00000600911 EPS15P42566 896 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 SLF2Q8IX21 1173 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 TAF6LQ9Y6J9 622 aa27.49■■□□□ 1.99
IRF3-227ENST00000600911 REC8O95072 547 aa27.48■■□□□ 1.99
IRF3-227ENST00000600911 CACNB3P54284 484 aa27.48■■□□□ 1.99
IRF3-227ENST00000600911 TDRD3Q9H7E2 651 aaKnown RBP27.48■■□□□ 1.99
IRF3-227ENST00000600911 MYOZ2Q9NPC6 264 aa27.48■■□□□ 1.99
IRF3-227ENST00000600911 GPRC5DQ9NZD1 345 aa27.48■■□□□ 1.99
IRF3-227ENST00000600911 RBM8AQ9Y5S9 174 aaKnown RBP27.48■■□□□ 1.99
IRF3-227ENST00000600911 LAMA4Q16363 1823 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 MYH1P12882 1939 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 SPDYE2BA6NHP3 402 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 SPDYE6P0CI01 402 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 DSCC1Q9BVC3 393 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 DDX4Q9NQI0 724 aaKnown RBP27.47■■□□□ 1.99
IRF3-227ENST00000600911 HDAC9Q9UKV0 1011 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 PALD1Q9ULE6 856 aa27.47■■□□□ 1.99
IRF3-227ENST00000600911 ASTN2O75129 1339 aaPredicted RBP27.47■■□□□ 1.99
IRF3-227ENST00000600911 NBPF9Q3BBW0 867 aa27.46■■□□□ 1.99
IRF3-227ENST00000600911 RBM26Q5T8P6 1007 aaKnown RBP27.46■■□□□ 1.99
IRF3-227ENST00000600911 KIAA1211Q6ZU35 1233 aa27.46■■□□□ 1.99
IRF3-227ENST00000600911 OGFOD1Q8N543 542 aa27.46■■□□□ 1.99
IRF3-227ENST00000600911 TRPM4Q8TD43 1214 aa27.46■■□□□ 1.99
IRF3-227ENST00000600911 USP40Q9NVE5 1235 aa27.46■■□□□ 1.99
IRF3-227ENST00000600911 PATL2C9JE40 543 aaKnown RBP27.45■■□□□ 1.99
IRF3-227ENST00000600911 WDHD1O75717 1129 aaPredicted RBP27.45■■□□□ 1.99
IRF3-227ENST00000600911 BAG3O95817 575 aa27.45■■□□□ 1.99
IRF3-227ENST00000600911 NFIAQ12857 509 aa27.45■■□□□ 1.99
IRF3-227ENST00000600911 TBC1D10BQ4KMP7 808 aaPredicted RBP27.45■■□□□ 1.99
IRF3-227ENST00000600911 IFNL3Q8IZI9 196 aa27.45■■□□□ 1.99
IRF3-227ENST00000600911 TGFBRAP1Q8WUH2 860 aa27.45■■□□□ 1.99
IRF3-227ENST00000600911 MKRN1Q9UHC7 482 aaKnown RBP27.45■■□□□ 1.99
IRF3-227ENST00000600911 LAMB1P07942 1786 aa27.45■■□□□ 1.99
IRF3-227ENST00000600911 FGAP02671 866 aa27.45■■□□□ 1.98
IRF3-227ENST00000600911 TEX11Q8IYF3 940 aa27.45■■□□□ 1.98
IRF3-227ENST00000600911 MTMR14Q8NCE2 650 aa27.45■■□□□ 1.98
IRF3-227ENST00000600911 WNT10BO00744 389 aa27.44■■□□□ 1.98
IRF3-227ENST00000600911 NECTIN1Q15223 517 aa27.44■■□□□ 1.98
IRF3-227ENST00000600911 DLGAP5Q15398 846 aa27.44■■□□□ 1.98
IRF3-227ENST00000600911 MAPKAPK5Q8IW41 473 aa27.44■■□□□ 1.98
IRF3-227ENST00000600911 DCP1AQ9NPI6 582 aaPredicted RBP27.44■■□□□ 1.98
IRF3-227ENST00000600911 ZC3H4Q9UPT8 1303 aaKnown RBP27.44■■□□□ 1.98
IRF3-227ENST00000600911 CYP2D7A0A087X1C5 515 aa27.43■■□□□ 1.98
IRF3-227ENST00000600911 CLRN2A0PK11 232 aa27.43■■□□□ 1.98
IRF3-227ENST00000600911 GLTPD2A6NH11 291 aa27.43■■□□□ 1.98
IRF3-227ENST00000600911 APPP05067 770 aa27.43■■□□□ 1.98
IRF3-227ENST00000600911 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
IRF3-227ENST00000600911 NOL10Q9BSC4 688 aaKnown RBP27.43■■□□□ 1.98
IRF3-227ENST00000600911 CRNKL1Q9BZJ0 848 aaKnown RBP27.43■■□□□ 1.98
IRF3-227ENST00000600911 SCAF8Q9UPN6 1271 aaKnown RBP27.43■■□□□ 1.98
IRF3-227ENST00000600911 SIPA1L1O43166 1804 aa27.42■■□□□ 1.98
IRF3-227ENST00000600911 POTECB2RU33 542 aa27.42■■□□□ 1.98
IRF3-227ENST00000600911 HIRAP54198 1017 aaPredicted RBP27.42■■□□□ 1.98
IRF3-227ENST00000600911 COL9A3Q14050 684 aaPredicted RBP27.42■■□□□ 1.98
IRF3-227ENST00000600911 SLC4A8Q2Y0W8 1093 aa27.42■■□□□ 1.98
IRF3-227ENST00000600911 WDR90Q96KV7 1748 aa27.42■■□□□ 1.98
IRF3-227ENST00000600911 GNAT2P19087 354 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 ZFPM1Q8IX07 1006 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 TBC1D32Q96NH3 1257 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 C22orf23Q9BZE7 217 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 NBPF3Q9H094 633 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 TACC3Q9Y6A5 838 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 FLT1P17948 1338 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 CYP2D6P10635 497 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 HSPA4P34932 840 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 PICALMQ13492 652 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 KIF4BQ2VIQ3 1234 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 L3MBTL3Q96JM7 780 aaPredicted RBP27.41■■□□□ 1.98
IRF3-227ENST00000600911 ZNF70Q9UC06 446 aaPredicted RBP27.41■■□□□ 1.98
IRF3-227ENST00000600911 FAM198AQ9UFP1 575 aa27.41■■□□□ 1.98
IRF3-227ENST00000600911 POLR2AP24928 1970 aaKnown RBP27.4■■□□□ 1.98
IRF3-227ENST00000600911 SLC27A2O14975 620 aa27.4■■□□□ 1.98
IRF3-227ENST00000600911 CYP21A2P08686 494 aa27.4■■□□□ 1.98
IRF3-227ENST00000600911 HAND2P61296 217 aa27.4■■□□□ 1.98
IRF3-227ENST00000600911 CREB3L3Q68CJ9 461 aa27.4■■□□□ 1.98
IRF3-227ENST00000600911 TSHZ2Q9NRE2 1034 aa27.4■■□□□ 1.98
IRF3-227ENST00000600911 SCN4AP35499 1836 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms