RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
CKS1BP3-201ENST00000600888 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
CKS1BP3-201ENST00000600888 MRC2Q9UBG0 1479 aa6.13□□□□□ -1.43
CKS1BP3-201ENST00000600888 PAGE1O75459 146 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 BMP6P22004 513 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 MRPL58Q14197 206 aaKnown RBP6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 HP1BP3Q5SSJ5 553 aaPredicted RBP6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 PDZD3Q86UT5 571 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 CEP41Q9BYV8 373 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 ZC3H12CQ9C0D7 883 aaKnown RBP6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 BCL11AQ9H165 835 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 CYP4F12Q9HCS2 524 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 TPSG1Q9NRR2 321 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 CEP164Q9UPV0 1460 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 SAMM50Q9Y512 469 aa6.12□□□□□ -1.43
CKS1BP3-201ENST00000600888 CCDC88BA6NC98 1476 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 FANCD2Q9BXW9 1451 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 CELA3AP09093 270 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 GSTP1P09211 210 aaKnown RBP6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 ST13P50502 369 aaKnown RBP6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 CCDC85BQ15834 202 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 ANKRD34AQ69YU3 496 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 TP53INP1Q96A56 240 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 CRELD1Q96HD1 420 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 EMILIN2Q9BXX0 1053 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 CCDC86Q9H6F5 360 aaKnown RBP6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 RAD18Q9NS91 495 aa6.11□□□□□ -1.43
CKS1BP3-201ENST00000600888 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 FDX2Q6P4F2 183 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 GRIN3AQ8TCU5 1115 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 KCNB2Q92953 911 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 FAM46AQ96IP4 442 aaKnown RBP6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 CBX8Q9HC52 389 aa6.1□□□□□ -1.43
CKS1BP3-201ENST00000600888 SART1O43290 800 aaKnown RBP6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 ZNF862O60290 1169 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 AOC2O75106 756 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 TIAF1O95411 115 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 DRD2P14416 443 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 LIG1P18858 919 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 SOX4Q06945 474 aaPredicted RBP6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 LRRC14Q15048 493 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 MAP1SQ66K74 1059 aaPredicted RBP6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 WDR89Q96FK6 387 aaPredicted RBP6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 NOC4LQ9BVI4 516 aaKnown RBP6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 CYP8B1Q9UNU6 501 aa6.09□□□□□ -1.43
CKS1BP3-201ENST00000600888 SYNGAP1Q96PV0 1343 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 PREPP48147 710 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 UVSSAQ2YD98 709 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 AKAP4Q5JQC9 854 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 RASIP1Q5U651 963 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 PCNX4Q63HM2 1172 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 TTBK2Q6IQ55 1244 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 ARMC10Q8N2F6 343 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 WDR18Q9BV38 432 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 CACNA2D2Q9NY47 1150 aa6.08□□□□□ -1.44
CKS1BP3-201ENST00000600888 FURINP09958 794 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 SLFN14P0C7P3 912 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 ADH5P11766 374 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 MAP3K11Q16584 847 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 RSPO4Q2I0M5 234 aaPredicted RBP6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 KIF4BQ2VIQ3 1234 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 LLGL2Q6P1M3 1020 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 GPBAR1Q8TDU6 330 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 UTP4Q969X6 686 aaKnown RBP6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 BACH2Q9BYV9 841 aa6.07□□□□□ -1.44
CKS1BP3-201ENST00000600888 URB2Q14146 1524 aaKnown RBP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 DHX15O43143 795 aaKnown RBP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 TRIM37O94972 964 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 H2AFB1P0C5Y9 115 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 H2AFB2P0C5Z0 115 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 RLBP1P12271 317 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 RPS26P62854 115 aaKnown RBP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 LDLRAD1Q5T700 205 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 SCARA3Q6AZY7 606 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 C2CD4AQ8NCU7 369 aaPredicted RBP6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 MYRFLQ96LU7 910 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 PPP1R9AQ9ULJ8 1098 aa6.06□□□□□ -1.44
CKS1BP3-201ENST00000600888 UNCXA6NJT0 531 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 GAS2O43903 313 aaKnown RBP6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 BMP3P12645 472 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 LIG3P49916 1009 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 USP11P51784 963 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 AGMOQ6ZNB7 445 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 PRR23CQ6ZRP0 262 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 DYMQ7RTS9 669 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 FAM20CQ8IXL6 584 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 ACSBG1Q96GR2 724 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 HIF3AQ9Y2N7 669 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 PCDHGC5Q9Y5F6 944 aa6.05□□□□□ -1.44
CKS1BP3-201ENST00000600888 ABCC8Q09428 1581 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms