RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CEP135Q66GS9 1140 aa23.46■■□□□ 1.35
SHKBP1-225ENST00000600733 NCBP1Q09161 790 aaKnown RBP23.45■■□□□ 1.35
SHKBP1-225ENST00000600733 SLC39A14Q15043 492 aa23.45■■□□□ 1.35
SHKBP1-225ENST00000600733 KRT40Q6A162 431 aa23.45■■□□□ 1.35
SHKBP1-225ENST00000600733 MYL10Q9BUA6 226 aa23.45■■□□□ 1.35
SHKBP1-225ENST00000600733 PAXBP1Q9Y5B6 917 aa23.45■■□□□ 1.35
SHKBP1-225ENST00000600733 TCRBV5S4A2TA0A5A2 114 aa23.45■■□□□ 1.34
SHKBP1-225ENST00000600733 CYP19A1P11511 503 aaPredicted RBP23.45■■□□□ 1.34
SHKBP1-225ENST00000600733 ISM2Q6H9L7 571 aa23.45■■□□□ 1.34
SHKBP1-225ENST00000600733 TRMT1Q9NXH9 659 aaKnown RBP23.45■■□□□ 1.34
SHKBP1-225ENST00000600733 CCDC112Q8NEF3 446 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 BPIFA3Q9BQP9 254 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 XPO4Q9C0E2 1151 aaKnown RBP23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 TBC1D2BQ9UPU7 963 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 UBE2Q2LH0YL09 131 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 SMC2O95347 1197 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 ARID4AP29374 1257 aaPredicted RBP23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 IFNKQ9P0W0 207 aa23.44■■□□□ 1.34
SHKBP1-225ENST00000600733 ANKRD36CQ5JPF3 1778 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 NLRP12P59046 1061 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 NAA30Q147X3 362 aaPredicted RBP23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 IGDCC4Q8TDY8 1250 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 AIDAQ96BJ3 306 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 STRBPQ96SI9 672 aaKnown RBP23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 LRP6O75581 1613 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 SNAP23O00161 211 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 PDE8AO60658 829 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 CDKL5O76039 1030 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 NYAP1Q6ZVC0 841 aa23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 BCL11BQ9C0K0 894 aaPredicted RBP23.43■■□□□ 1.34
SHKBP1-225ENST00000600733 NUP98P52948 1817 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 ECM29Q5VYK3 1845 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 UBN2Q6ZU65 1347 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 ZBTB43O43298 467 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 RANBP6O60518 1105 aaKnown RBP23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 GNL2Q13823 731 aaKnown RBP23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 NFXL1Q6ZNB6 911 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 LY9Q9HBG7 655 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 CBX1P83916 185 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 NCAPHQ15003 741 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 PTPN14Q15678 1187 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 NTRK3Q16288 839 aa23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 EPB41L4AQ9HCS5 686 aaPredicted RBP23.42■■□□□ 1.34
SHKBP1-225ENST00000600733 SYKP43405 635 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 GSDMDP57764 484 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 TMEM67Q5HYA8 995 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 SHC4Q6S5L8 630 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 CCAR2Q8N163 923 aaKnown RBP23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 TMEM87BQ96K49 555 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 FAM217BQ9NTX9 383 aaPredicted RBP23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 BTG4Q9NY30 223 aa23.41■■□□□ 1.34
SHKBP1-225ENST00000600733 CTDSPL2Q05D32 466 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 PTPAQ15257 358 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 CPLX2Q6PUV4 134 aaKnown RBP23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 TMC6Q7Z403 805 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 GOLGA8AA7E2F4 631 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 UQCRFS1P1P0C7P4 283 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 U2AF2P26368 475 aaKnown RBP eCLIP23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 IARSP41252 1262 aaKnown RBP23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 LPIN2Q92539 896 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 CLIC6Q96NY7 704 aa23.4■■□□□ 1.34
SHKBP1-225ENST00000600733 LMOD1P29536 600 aaPredicted RBP23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 DZIP3Q86Y13 1208 aaKnown RBP23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 MAGEB6Q8N7X4 407 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 SPATA5Q8NB90 893 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 MAP3K14Q99558 947 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 ZSWIM5Q9P217 1185 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 IMPACTQ9P2X3 320 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 TACC3Q9Y6A5 838 aa23.39■■□□□ 1.34
SHKBP1-225ENST00000600733 BCL9O00512 1426 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 SPDYE4A6NLX3 237 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 MBD4O95243 580 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 FGFR2P21802 821 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 ARMCX5Q6P1M9 558 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 HPSEQ9Y251 543 aa23.39■■□□□ 1.33
SHKBP1-225ENST00000600733 PPP6R2O75170 966 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 RASGRF1Q13972 1273 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 SGMS1Q86VZ5 419 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 IFNL3Q8IZI9 196 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 NAPBQ9H115 298 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 ARMT1Q9H993 441 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 SMAP1Q8IYB5 467 aaPredicted RBP23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 RGS22Q8NE09 1264 aa23.38■■□□□ 1.33
SHKBP1-225ENST00000600733 ATP1A3P13637 1013 aa23.37■■□□□ 1.33
SHKBP1-225ENST00000600733 PNOCQ13519 176 aa23.37■■□□□ 1.33
SHKBP1-225ENST00000600733 TIGD1Q96MW7 591 aa23.37■■□□□ 1.33
SHKBP1-225ENST00000600733 SLC26A6Q9BXS9 759 aa23.37■■□□□ 1.33
SHKBP1-225ENST00000600733 HSD3B7Q9H2F3 369 aa23.37■■□□□ 1.33
SHKBP1-225ENST00000600733 PATL2C9JE40 543 aaKnown RBP23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 IFIT3O14879 490 aaKnown RBP23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 TPM4P67936 248 aa23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 TRIM29Q14134 588 aa23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 SYCP1Q15431 976 aa23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 JMYQ8N9B5 988 aa23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 SLC12A7Q9Y666 1083 aa23.36■■□□□ 1.33
SHKBP1-225ENST00000600733 CHD4Q14839 1912 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms