RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TLR7Q9NYK1 1049 aaKnown RBP22.73■■□□□ 1.23
SHKBP1-202ENST00000593764 TMOD2Q9NZR1 351 aa22.73■■□□□ 1.23
SHKBP1-202ENST00000593764 TSKSQ9UJT2 592 aa22.73■■□□□ 1.23
SHKBP1-202ENST00000593764 GAKO14976 1311 aa22.73■■□□□ 1.23
SHKBP1-202ENST00000593764 CA12O43570 354 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 MECOMQ03112 1051 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 CCDC158Q5M9N0 1113 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 ERC1Q8IUD2 1116 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 CLMNQ96JQ2 1002 aa22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 ZNF512BQ96KM6 892 aaPredicted RBP22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 CCDC8Q9H0W5 538 aaPredicted RBP22.72■■□□□ 1.23
SHKBP1-202ENST00000593764 MYH2Q9UKX2 1941 aa22.71■■□□□ 1.23
SHKBP1-202ENST00000593764 UNCXA6NJT0 531 aa22.71■■□□□ 1.23
SHKBP1-202ENST00000593764 TTC39AQ5SRH9 613 aa22.71■■□□□ 1.23
SHKBP1-202ENST00000593764 DZIP1Q86YF9 867 aaKnown RBP22.71■■□□□ 1.23
SHKBP1-202ENST00000593764 USP40Q9NVE5 1235 aa22.71■■□□□ 1.23
SHKBP1-202ENST00000593764 HMMRO75330 724 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 IREB2P48200 963 aaKnown RBP22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 NFIAQ12857 509 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 HSP90AB4PQ58FF6 505 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 SPRYD7Q5W111 196 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 RHPN1Q8TCX5 695 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 SLC10A4Q96EP9 437 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 SNRKQ9NRH2 765 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 FAM198AQ9UFP1 575 aa22.7■■□□□ 1.22
SHKBP1-202ENST00000593764 AKAP11Q9UKA4 1901 aa22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 SLF2Q8IX21 1173 aa22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 REM2Q8IYK8 340 aaPredicted RBP22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 FAM151AQ8WW52 585 aa22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 NSUN4Q96CB9 384 aaKnown RBP22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 RNF186Q9NXI6 227 aa22.69■■□□□ 1.22
SHKBP1-202ENST00000593764 ANKRD13AQ8IZ07 590 aa22.68■■□□□ 1.22
SHKBP1-202ENST00000593764 IL1RAPL2Q9NP60 686 aa22.68■■□□□ 1.22
SHKBP1-202ENST00000593764 RPAP1Q9BWH6 1393 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 MROH7-TTC4A0A0A0MT08 1334 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 GPR75-ASB3A0A0A6YYF3 556 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 CYP2E1P05181 493 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 TM4SF4P48230 202 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 TCP10Q12799 353 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 AACSQ86V21 672 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 ZFPM1Q8IX07 1006 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 SAGE1Q9NXZ1 904 aa22.67■■□□□ 1.22
SHKBP1-202ENST00000593764 TRPA1O75762 1119 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 BTDP43251 543 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 ZAP70P43403 619 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 IFFO2Q5TF58 517 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 KIF1BPQ96EK5 621 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 WNK4Q96J92 1243 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 IDI2Q9BXS1 227 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 RAI14Q9P0K7 980 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 LRP2BPQ9P2M1 347 aa22.66■■□□□ 1.22
SHKBP1-202ENST00000593764 APBB1O00213 710 aa22.65■■□□□ 1.22
SHKBP1-202ENST00000593764 WDHD1O75717 1129 aaPredicted RBP22.65■■□□□ 1.22
SHKBP1-202ENST00000593764 GJA5P36382 358 aa22.65■■□□□ 1.22
SHKBP1-202ENST00000593764 RHBDL3P58872 404 aa22.65■■□□□ 1.22
SHKBP1-202ENST00000593764 MAP3K9P80192 1104 aa22.65■■□□□ 1.22
SHKBP1-202ENST00000593764 RFX7Q2KHR2 1363 aa22.64■■□□□ 1.22
SHKBP1-202ENST00000593764 RAB11FIP3O75154 756 aa22.64■■□□□ 1.21
SHKBP1-202ENST00000593764 ZBTB48P10074 688 aaPredicted RBP22.64■■□□□ 1.21
SHKBP1-202ENST00000593764 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
SHKBP1-202ENST00000593764 GSTO1P78417 241 aa22.64■■□□□ 1.21
SHKBP1-202ENST00000593764 LDHCP07864 332 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 RGS3P49796 1198 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 VGLL4Q14135 290 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 MIGA2Q7L4E1 593 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 HOOK2Q96ED9 719 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 ELP3Q9H9T3 547 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 DDX4Q9NQI0 724 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 PIH1D3Q9NQM4 214 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 OTOFQ9HC10 1997 aa22.63■■□□□ 1.21
SHKBP1-202ENST00000593764 ENTPD3O75355 529 aa22.62■■□□□ 1.21
SHKBP1-202ENST00000593764 SH3BP5LQ7L8J4 393 aa22.62■■□□□ 1.21
SHKBP1-202ENST00000593764 CLASRPQ8N2M8 674 aaKnown RBP22.62■■□□□ 1.21
SHKBP1-202ENST00000593764 CASP8AP2Q9UKL3 1982 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 SREBF2Q12772 1141 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 OPTNQ96CV9 577 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 NDUFB9Q9Y6M9 179 aa22.61■■□□□ 1.21
SHKBP1-202ENST00000593764 MANSC4A6NHS7 340 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-202ENST00000593764 ZKSCAN4Q969J2 545 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-202ENST00000593764 WRNIP1Q96S55 665 aa22.6■■□□□ 1.21
SHKBP1-202ENST00000593764 ZNF112Q9UJU3 913 aa22.6■■□□□ 1.21
SHKBP1-202ENST00000593764 MYO5AQ9Y4I1 1855 aaKnown RBP22.6■■□□□ 1.21
SHKBP1-202ENST00000593764 INHBEP58166 350 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 NAA16Q6N069 864 aaPredicted RBP22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 ADGRA1Q86SQ6 560 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 ANTXR1Q9H6X2 564 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 CSADQ9Y600 493 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 SNCAIPQ9Y6H5 919 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 ATRNL1Q5VV63 1379 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 AK9Q5TCS8 1911 aa22.59■■□□□ 1.21
SHKBP1-202ENST00000593764 DDTLA6NHG4 134 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms