RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 C1orf115Q9H7X2 142 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 ABCF2Q9UG63 623 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 IGF2BP3O00425 579 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 POLA2Q14181 598 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 GORABQ5T7V8 394 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 FAM151AQ8WW52 585 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 HOOK2Q96ED9 719 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 CSADQ9Y600 493 aa16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 PDS5AQ29RF7 1337 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-218ENST00000593053 AKAP11Q9UKA4 1901 aa16.16■□□□□ 0.18
PRKCSH-218ENST00000593053 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
PRKCSH-218ENST00000593053 TCP10Q12799 353 aa16.16■□□□□ 0.18
PRKCSH-218ENST00000593053 NFIAQ12857 509 aa16.16■□□□□ 0.18
PRKCSH-218ENST00000593053 WRNIP1Q96S55 665 aa16.16■□□□□ 0.18
PRKCSH-218ENST00000593053 RPAP1Q9BWH6 1393 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 DCAF15Q66K64 600 aa16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 SSH3Q8TE77 659 aa16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
PRKCSH-218ENST00000593053 FKTNO75072 461 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 OTUD7BQ6GQQ9 843 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 SPATA5Q8NB90 893 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 ZKSCAN4Q969J2 545 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 PTPN18Q99952 460 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 SNCAIPQ9Y6H5 919 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 GAKO14976 1311 aa16.14■□□□□ 0.17
PRKCSH-218ENST00000593053 TESPA1A2RU30 521 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 SPDYE5A6NIY4 337 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 ARID4AP29374 1257 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 PANK1Q8TE04 598 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 MS4A4AQ96JQ5 239 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
PRKCSH-218ENST00000593053 CCL15-CCL14A0A0B4J2E2 113 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 BTDP43251 543 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 RGS3P49796 1198 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 GTF2A2P52657 109 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 MECOMQ03112 1051 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 CRHR2Q13324 411 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 CCL15Q16663 113 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 BRI3BPQ8WY22 251 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 FAM163AQ96GL9 167 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
PRKCSH-218ENST00000593053 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 UQCRFS1P1P0C7P4 283 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 INPP5BP32019 993 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 MCAMP43121 646 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 PKN2Q16513 984 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 IDI2Q9BXS1 227 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 MROH7-TTC4A0A0A0MT08 1334 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
PRKCSH-218ENST00000593053 ENTPD3O75355 529 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 TTC39AQ5SRH9 613 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 ZNF384Q8TF68 577 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-218ENST00000593053 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 IRF6O14896 467 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 GSTO1P78417 241 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 PICALMQ13492 652 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 CCDC158Q5M9N0 1113 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 NSUN4Q96CB9 384 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 RFX7Q2KHR2 1363 aa16.09■□□□□ 0.17
PRKCSH-218ENST00000593053 LDHCP07864 332 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 CETPP11597 493 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 MS4A1P11836 297 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 RGS19P49795 217 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 PPIL2Q13356 520 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 FAM43AQ8N2R8 423 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 DDX4Q9NQI0 724 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
PRKCSH-218ENST00000593053 SOX10P56693 466 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms