RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
SMAD4-215ENST00000592911 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
SMAD4-215ENST00000592911 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
SMAD4-215ENST00000592911 APAF1O14727 1248 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
SMAD4-215ENST00000592911 HIBADHP31937 336 aaKnown RBP11.04□□□□□ -0.64
SMAD4-215ENST00000592911 GRK4P32298 578 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 CCDC57Q2TAC2 916 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 DPF3Q92784 378 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 MS4A3Q96HJ5 214 aa11.04□□□□□ -0.64
SMAD4-215ENST00000592911 MYH13Q9UKX3 1938 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 DLL1O00548 723 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 CRKP46108 304 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
SMAD4-215ENST00000592911 LDHAL6AQ6ZMR3 332 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 SLC17A8Q8NDX2 589 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 RAET1EQ8TD07 263 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 SH3TC2Q8TF17 1288 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 TEKT1Q969V4 418 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 ZDHHC15Q96MV8 337 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 TDRD3Q9H7E2 651 aaKnown RBP11.03□□□□□ -0.64
SMAD4-215ENST00000592911 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 SNCAIPQ9Y6H5 919 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
SMAD4-215ENST00000592911 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.64
SMAD4-215ENST00000592911 IRF6O14896 467 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-215ENST00000592911 TAF5LO75529 589 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 PSMC4P43686 418 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 FOXO4P98177 505 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 FKBP5Q13451 457 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-215ENST00000592911 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
SMAD4-215ENST00000592911 TSPYL6Q8N831 410 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 WRNIP1Q96S55 665 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 PARK7Q99497 189 aaKnown RBP11.02□□□□□ -0.65
SMAD4-215ENST00000592911 ZNF341Q9BYN7 854 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 TMEM39BQ9GZU3 492 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 RIPOR2Q9Y4F9 1068 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 PCDHAC2Q9Y5I4 1007 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 DOCK3Q8IZD9 2030 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 MROH5Q6ZUA9 1318 aa11.02□□□□□ -0.65
SMAD4-215ENST00000592911 PTPRFP10586 1907 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 GALR2O43603 387 aaPredicted RBP11.01□□□□□ -0.65
SMAD4-215ENST00000592911 GABBR2O75899 941 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 BMP8BP34820 402 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 FCGRTP55899 365 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
SMAD4-215ENST00000592911 HHIPL2Q6UWX4 724 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 AOX1Q06278 1338 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
SMAD4-215ENST00000592911 TCP10L2B9ZVM9 353 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 CXCL11O14625 94 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 FARP2O94887 1054 aaPredicted RBP11□□□□□ -0.65
SMAD4-215ENST00000592911 SGPL1O95470 568 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 CCL5P13501 91 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 OSBPP22059 807 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 IRF5Q13568 498 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 CAVIN4Q5BKX8 364 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 FBXO33Q7Z6M2 555 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 FAM84BQ96KN1 310 aaPredicted RBP11□□□□□ -0.65
SMAD4-215ENST00000592911 ARHGAP39Q9C0H5 1083 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 RNF208Q9H0X6 261 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 ZNF112Q9UJU3 913 aa11□□□□□ -0.65
SMAD4-215ENST00000592911 GRM8O00222 908 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 PDHXO00330 501 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-215ENST00000592911 BCRP11274 1271 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 CLCN6P51797 869 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 MTFR1Q15390 333 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 BEND3Q5T5X7 828 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 LMBR1LQ6UX01 489 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 G2E3Q7L622 706 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 VPS37DQ86XT2 251 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
SMAD4-215ENST00000592911 U2AF1L4Q8WU68 220 aaKnown RBP10.99□□□□□ -0.65
SMAD4-215ENST00000592911 ALPK3Q96L96 1907 aa10.99□□□□□ -0.65
SMAD4-215ENST00000592911 SNAP23O00161 211 aa10.98□□□□□ -0.65
SMAD4-215ENST00000592911 EVI5O60447 810 aa10.98□□□□□ -0.65
SMAD4-215ENST00000592911 FASTKD5Q7L8L6 764 aaKnown RBP10.98□□□□□ -0.65
SMAD4-215ENST00000592911 FAM151AQ8WW52 585 aa10.98□□□□□ -0.65
SMAD4-215ENST00000592911 PRKRIP1Q9H875 184 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-215ENST00000592911 PAK6Q9NQU5 681 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-215ENST00000592911 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-215ENST00000592911 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
SMAD4-215ENST00000592911 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
SMAD4-215ENST00000592911 LRIT3Q3SXY7 679 aa10.97□□□□□ -0.65
SMAD4-215ENST00000592911 APOBEC3HQ6NTF7 200 aaKnown RBP10.97□□□□□ -0.65
SMAD4-215ENST00000592911 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
SMAD4-215ENST00000592911 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
SMAD4-215ENST00000592911 CRISPLD2Q9H0B8 497 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms