RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 THBS1P07996 1170 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 PANK3Q9H999 370 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 POLKQ9UBT6 870 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 WASHC2AQ641Q2 1341 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 TOGARAM1Q9Y4F4 1720 aa10.27□□□□□ -0.77
VMP1-213ENST00000591877 ITGB4P16144 1822 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 H3BRB1 525 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 IGFBP4P22692 258 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 SLC15A2Q16348 729 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 GLYCTKQ8IVS8 523 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
VMP1-213ENST00000591877 TUT1Q9H6E5 874 aaKnown RBP10.26□□□□□ -0.77
VMP1-213ENST00000591877 QSER1Q2KHR3 1735 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
VMP1-213ENST00000591877 ABL1P00519 1130 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 ITGB7P26010 798 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 SCNN1AP37088 669 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
VMP1-213ENST00000591877 LINC00114Q6XXX2 140 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
VMP1-213ENST00000591877 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
VMP1-213ENST00000591877 UNCXA6NJT0 531 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 SPATA31C2B4DYI2 1134 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 BACH1O14867 736 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 CYP27B1O15528 508 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
VMP1-213ENST00000591877 AMPD1P23109 780 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 ZNF827Q17R98 1081 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 CC2D2BQ6DHV5 1058 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 CD163Q86VB7 1156 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 KRTAP1-3Q8IUG1 177 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
VMP1-213ENST00000591877 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 BCL2L13Q9BXK5 485 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 SPON1Q9HCB6 807 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 STK32BQ9NY57 414 aa10.24□□□□□ -0.77
VMP1-213ENST00000591877 HOXB4P17483 251 aaPredicted RBP10.23□□□□□ -0.77
VMP1-213ENST00000591877 TNNT2P45379 298 aaPredicted RBP10.23□□□□□ -0.77
VMP1-213ENST00000591877 KCNQ4P56696 695 aa10.23□□□□□ -0.77
VMP1-213ENST00000591877 FKBP4Q02790 459 aaKnown RBP eCLIP10.23□□□□□ -0.77
VMP1-213ENST00000591877 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
VMP1-213ENST00000591877 SYTL4Q96C24 671 aaPredicted RBP10.23□□□□□ -0.77
VMP1-213ENST00000591877 GDF2Q9UK05 429 aaPredicted RBP10.23□□□□□ -0.77
VMP1-213ENST00000591877 KIF7Q2M1P5 1343 aa10.23□□□□□ -0.77
VMP1-213ENST00000591877 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 TMEM229AB2RXF0 380 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 ZBTB7AO95365 584 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 ZNF16P17020 682 aaPredicted RBP10.22□□□□□ -0.77
VMP1-213ENST00000591877 SCTRP47872 440 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 CLN3Q13286 438 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 ZNF211Q13398 564 aaPredicted RBP10.22□□□□□ -0.77
VMP1-213ENST00000591877 EIF4A2Q14240 407 aaKnown RBP10.22□□□□□ -0.77
VMP1-213ENST00000591877 COL19A1Q14993 1142 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
VMP1-213ENST00000591877 SEMA6BQ9H3T3 888 aa10.22□□□□□ -0.77
VMP1-213ENST00000591877 COL24A1Q17RW2 1714 aa10.21□□□□□ -0.77
VMP1-213ENST00000591877 CHRNA4P43681 627 aa10.21□□□□□ -0.77
VMP1-213ENST00000591877 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.77
VMP1-213ENST00000591877 DCTN4Q9UJW0 460 aa10.21□□□□□ -0.77
VMP1-213ENST00000591877 PHF24Q9UPV7 400 aa10.21□□□□□ -0.77
VMP1-213ENST00000591877 PCDH11XQ9BZA7 1347 aa10.21□□□□□ -0.78
VMP1-213ENST00000591877 PCDH11YQ9BZA8 1340 aa10.21□□□□□ -0.78
VMP1-213ENST00000591877 C5P01031 1676 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 PHKA2P46019 1235 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 SCNN1DP51172 638 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 DOC2BQ14184 412 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 GOLGA6L1Q8N7Z2 621 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 HELQQ8TDG4 1101 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 ASB16Q96NS5 453 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 ARHGEF10LQ9HCE6 1279 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
VMP1-213ENST00000591877 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
VMP1-213ENST00000591877 NPR3P17342 541 aa10.19□□□□□ -0.78
VMP1-213ENST00000591877 ECM1Q16610 540 aa10.19□□□□□ -0.78
VMP1-213ENST00000591877 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
VMP1-213ENST00000591877 ZSCAN29Q8IWY8 852 aaPredicted RBP10.19□□□□□ -0.78
VMP1-213ENST00000591877 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
VMP1-213ENST00000591877 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 C2CD2LO14523 706 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 GNB5O14775 395 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 EPHA4P54764 986 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 GDF10P55107 478 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 ARHGAP4P98171 946 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 ZMYM1Q5SVZ6 1142 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 CYP2U1Q7Z449 544 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 MRRFQ96E11 262 aaKnown RBP10.18□□□□□ -0.78
VMP1-213ENST00000591877 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 MKNK1Q9BUB5 465 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
VMP1-213ENST00000591877 RAB6BQ9NRW1 208 aa10.18□□□□□ -0.78
VMP1-213ENST00000591877 PPP1R1BQ9UD71 204 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms