RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PI4KBQ9UBF8 816 aa7.23□□□□□ -1.25
SMAD4-212ENST00000591126 PPRC1Q5VV67 1664 aaKnown RBP7.23□□□□□ -1.25
SMAD4-212ENST00000591126 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 EIF5P55010 431 aaKnown RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 TRIM28Q13263 835 aaKnown RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 A0A1B0GUL7 405 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 MBD3O95983 291 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 SSBP05455 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 TMOD1P28289 359 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 METAP2P50579 478 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 NEK4P51957 841 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 KRT85P78386 507 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 CERKLQ49MI3 558 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 GIMAP8Q8ND71 665 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 IMPG2Q9BZV3 1241 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 ADARB2Q9NS39 739 aaKnown RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 ZBTB43O43298 467 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 CETPP11597 493 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 RTN1Q16799 776 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 FAM160B1Q5W0V3 765 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 RCSD1Q6JBY9 416 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 LRRIQ1Q96JM4 1722 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 CCDC171Q6TFL3 1326 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 PRC1O43663 620 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 FOSP01100 380 aaPredicted RBP7.22□□□□□ -1.25
SMAD4-212ENST00000591126 NAPAP54920 295 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 VPS36Q86VN1 386 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 KANSL2Q9H9L4 492 aa7.22□□□□□ -1.25
SMAD4-212ENST00000591126 MROH1Q8NDA8 1641 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 A0A0U1RQG5 324 aaPredicted RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 CA8P35219 290 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 CHRNDQ07001 517 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 HDAC1Q13547 482 aaPredicted RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 GPATCH4Q5T3I0 446 aaKnown RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 NLRP10Q86W26 655 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 ERO1AQ96HE7 468 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 C8orf76Q96K31 380 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 MAP7D2Q96T17 732 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 EXOC7Q9UPT5 735 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 KAT6BQ8WYB5 2073 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 RICTORQ6R327 1708 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 PALM3A6NDB9 673 aaPredicted RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 CCP110O43303 1012 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 CYP19A1P11511 503 aaPredicted RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 USP17L2Q6R6M4 530 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 FAM114A1Q8IWE2 563 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 SLC17A8Q8NDX2 589 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 NEK1Q96PY6 1258 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 BICC1Q9H694 974 aaKnown RBP7.21□□□□□ -1.25
SMAD4-212ENST00000591126 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 NR2E3Q9Y5X4 410 aa7.21□□□□□ -1.25
SMAD4-212ENST00000591126 ZC3H4Q9UPT8 1303 aaKnown RBP7.21□□□□□ -1.26
SMAD4-212ENST00000591126 BACH1O14867 736 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 SLC8A3P57103 927 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 FKBP1BP68106 108 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 HDLBPQ00341 1268 aaKnown RBP7.21□□□□□ -1.26
SMAD4-212ENST00000591126 SNAPC2Q13487 334 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 NBR1Q14596 966 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 KIF4BQ2VIQ3 1234 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 TNNI3KQ59H18 835 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 OTUD6AQ7L8S5 288 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 FPGT-TNNI3KV9GXZ4 949 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 C19orf81C9J6K1 198 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 TRIM27P14373 513 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 ANAPC15P60006 121 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 PDE4DQ08499 809 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 STRIP1Q5VSL9 837 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 HAUS3Q68CZ6 603 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 GALNT17Q6IS24 598 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 USP50Q70EL3 339 aaPredicted RBP7.21□□□□□ -1.26
SMAD4-212ENST00000591126 C8orf58Q8NAV2 365 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 RAET1EQ8TD07 263 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 IFT74Q96LB3 600 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 HERC5Q9UII4 1024 aaKnown RBP7.21□□□□□ -1.26
SMAD4-212ENST00000591126 ATP6V0A2Q9Y487 856 aa7.21□□□□□ -1.26
SMAD4-212ENST00000591126 SOCS7O14512 581 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 XPOTO43592 962 aaKnown RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 STX6O43752 255 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 SMTNP53814 917 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 TKFCQ3LXA3 575 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 IL17REQ8NFR9 667 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 RMND1Q9NWS8 449 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 NEXMIFQ5QGS0 1516 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 PDE8BO95263 885 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 SRGAP2BP0DMP2 458 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 CNGA1P29973 690 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 KIAA0825Q8IV33 1275 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 IWS1Q96ST2 819 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ZNF215Q9UL58 517 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 MANSC4A6NHS7 340 aaPredicted RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ZFYVE27Q5T4F4 411 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 LARP1BQ659C4 914 aaKnown RBP7.2□□□□□ -1.26
SMAD4-212ENST00000591126 KCNV1Q6PIU1 500 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ANKRD35Q8N283 1001 aa7.2□□□□□ -1.26
SMAD4-212ENST00000591126 ANGEL1Q9UNK9 670 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms