RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 DEFB129Q9H1M3 183 aa26.31■■□□□ 1.8
R3HDM4-206ENST00000590454 MYH13Q9UKX3 1938 aa26.31■■□□□ 1.8
R3HDM4-206ENST00000590454 FRAT2O75474 233 aaPredicted RBP26.3■■□□□ 1.8
R3HDM4-206ENST00000590454 GRIK5Q16478 980 aa26.3■■□□□ 1.8
R3HDM4-206ENST00000590454 HABP4Q5JVS0 413 aaKnown RBP26.3■■□□□ 1.8
R3HDM4-206ENST00000590454 PI16Q6UXB8 463 aa26.3■■□□□ 1.8
R3HDM4-206ENST00000590454 FZD1Q9UP38 647 aa26.3■■□□□ 1.8
R3HDM4-206ENST00000590454 PPP1R12BO60237 982 aaPredicted RBP26.29■■□□□ 1.8
R3HDM4-206ENST00000590454 DLGAP5Q15398 846 aa26.29■■□□□ 1.8
R3HDM4-206ENST00000590454 ANKRD45Q5TZF3 282 aa26.29■■□□□ 1.8
R3HDM4-206ENST00000590454 B4GALNT3Q6L9W6 998 aa26.29■■□□□ 1.8
R3HDM4-206ENST00000590454 GNL3LQ9NVN8 582 aaKnown RBP26.29■■□□□ 1.8
R3HDM4-206ENST00000590454 POTEFA5A3E0 1075 aa26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 IFIT2P09913 472 aaKnown RBP26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 ARID4AP29374 1257 aaPredicted RBP26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 OTUD7AQ8TE49 926 aaPredicted RBP26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 WNK4Q96J92 1243 aa26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 PPP2R3BQ9Y5P8 575 aa26.28■■□□□ 1.8
R3HDM4-206ENST00000590454 UNCXA6NJT0 531 aa26.27■■□□□ 1.8
R3HDM4-206ENST00000590454 MCAMP43121 646 aa26.27■■□□□ 1.8
R3HDM4-206ENST00000590454 TTC39AQ5SRH9 613 aa26.27■■□□□ 1.8
R3HDM4-206ENST00000590454 ERO1AQ96HE7 468 aa26.27■■□□□ 1.8
R3HDM4-206ENST00000590454 HMG20BQ9P0W2 317 aa26.27■■□□□ 1.8
R3HDM4-206ENST00000590454 IGF2BP3O00425 579 aaKnown RBP eCLIP26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 CCDC158Q5M9N0 1113 aa26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 MFSD14BQ5SR56 506 aa26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 OTUD7BQ6GQQ9 843 aa26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 MTMR14Q8NCE2 650 aa26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 SNRKQ9NRH2 765 aa26.26■■□□□ 1.79
R3HDM4-206ENST00000590454 SUPT20HL1Q3ZLR7 823 aa26.25■■□□□ 1.79
R3HDM4-206ENST00000590454 CLMNQ96JQ2 1002 aa26.25■■□□□ 1.79
R3HDM4-206ENST00000590454 DENND2AQ9ULE3 1009 aa26.25■■□□□ 1.79
R3HDM4-206ENST00000590454 PTPN22Q9Y2R2 807 aa26.25■■□□□ 1.79
R3HDM4-206ENST00000590454 F8W031 263 aaPredicted RBP26.24■■□□□ 1.79
R3HDM4-206ENST00000590454 SEMA3EO15041 775 aa26.24■■□□□ 1.79
R3HDM4-206ENST00000590454 NDUFB9Q9Y6M9 179 aa26.24■■□□□ 1.79
R3HDM4-206ENST00000590454 ZBTB22O15209 634 aa26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 MYO1BO43795 1136 aa26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 UQCRFS1P1P0C7P4 283 aa26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 FKBP1AP62942 108 aaKnown RBP26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 TSHZ3Q63HK5 1081 aa26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 SPATA5Q8NB90 893 aa26.23■■□□□ 1.79
R3HDM4-206ENST00000590454 NUCB1Q02818 461 aa26.22■■□□□ 1.79
R3HDM4-206ENST00000590454 CD99L2Q8TCZ2 262 aa26.22■■□□□ 1.79
R3HDM4-206ENST00000590454 ZNF512BQ96KM6 892 aaPredicted RBP26.22■■□□□ 1.79
R3HDM4-206ENST00000590454 LNPKQ9C0E8 428 aa26.22■■□□□ 1.79
R3HDM4-206ENST00000590454 IREB2P48200 963 aaKnown RBP26.21■■□□□ 1.79
R3HDM4-206ENST00000590454 TBC1D9Q6ZT07 1266 aa26.21■■□□□ 1.79
R3HDM4-206ENST00000590454 WDR66Q8TBY9 1149 aa26.21■■□□□ 1.79
R3HDM4-206ENST00000590454 ARMC5Q96C12 935 aa26.21■■□□□ 1.79
R3HDM4-206ENST00000590454 EFCC1Q9HA90 598 aa26.21■■□□□ 1.79
R3HDM4-206ENST00000590454 ZAP70P43403 619 aa26.2■■□□□ 1.78
R3HDM4-206ENST00000590454 CRHR2Q13324 411 aa26.2■■□□□ 1.78
R3HDM4-206ENST00000590454 PCDHAC2Q9Y5I4 1007 aa26.2■■□□□ 1.78
R3HDM4-206ENST00000590454 SSC5DA1L4H1 1573 aa26.2■■□□□ 1.78
R3HDM4-206ENST00000590454 PDS5AQ29RF7 1337 aaKnown RBP26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 SALL3Q9BXA9 1300 aa26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 SP3Q02447 781 aa26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 CFAP100Q494V2 611 aa26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 CHD1LQ86WJ1 897 aa26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 TBC1D22AQ8WUA7 517 aa26.19■■□□□ 1.78
R3HDM4-206ENST00000590454 CLRN2A0PK11 232 aa26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 CYP2E1P05181 493 aaPredicted RBP26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 EN2P19622 333 aaPredicted RBP26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 PRDX5P30044 214 aa26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 NBPF12Q5TAG4 269 aaPredicted RBP26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 ANKRD13AQ8IZ07 590 aa26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 VEZTQ9HBM0 779 aa26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 TTF2Q9UNY4 1162 aaKnown RBP26.18■■□□□ 1.78
R3HDM4-206ENST00000590454 SALL1Q9NSC2 1324 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 TESPA1A2RU30 521 aaPredicted RBP26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 SPDYE2BA6NHP3 402 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 USP2O75604 605 aaPredicted RBP26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 SPDYE6P0CI01 402 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 ATP5JP18859 108 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 PRMT6Q96LA8 375 aaPredicted RBP26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 BOLA2Q9H3K6 86 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 ECHDC1Q9NTX5 307 aa26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 ZBTB47Q9UFB7 747 aaPredicted RBP26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 MYO5AQ9Y4I1 1855 aaKnown RBP26.17■■□□□ 1.78
R3HDM4-206ENST00000590454 GJA5P36382 358 aa26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 EDC3Q96F86 508 aaKnown RBP26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 PTPN18Q99952 460 aa26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 TMEM106CQ9BVX2 250 aa26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 PIH1D3Q9NQM4 214 aaKnown RBP26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 ABCF2Q9UG63 623 aa26.16■■□□□ 1.78
R3HDM4-206ENST00000590454 AOX1Q06278 1338 aa26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 MX1P20591 662 aa26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 PDE4AP27815 886 aa26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 RASA3Q14644 834 aa26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 CCDC136Q96JN2 1154 aa26.14■■□□□ 1.78
R3HDM4-206ENST00000590454 LDHBP07195 334 aaKnown RBP26.13■■□□□ 1.77
R3HDM4-206ENST00000590454 RBM5P52756 815 aaKnown RBP eCLIP26.13■■□□□ 1.77
R3HDM4-206ENST00000590454 ARHGEF6Q15052 776 aa26.13■■□□□ 1.77
R3HDM4-206ENST00000590454 ZNF384Q8TF68 577 aa26.13■■□□□ 1.77
R3HDM4-206ENST00000590454 DNAJC2Q99543 621 aaKnown RBP26.13■■□□□ 1.77
R3HDM4-206ENST00000590454 DIXDC1Q155Q3 683 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms