RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MROH7-TTC4A0A0A0MT08 1334 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 GAKO14976 1311 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 TRIM6-TRIM34B2RNG4 842 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 CAPN15O75808 1086 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 EGFRP00533 1210 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 VEGFBP49765 207 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 APOBEC3HQ6NTF7 200 aaKnown RBP23.67■■□□□ 1.38
CIRBP-220ENST00000588917 MAGEB6Q8N7X4 407 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 DAGLAQ9Y4D2 1042 aa23.67■■□□□ 1.38
CIRBP-220ENST00000588917 GPR75-ASB3A0A0A6YYF3 556 aa23.66■■□□□ 1.38
CIRBP-220ENST00000588917 CYP7A1P22680 504 aa23.66■■□□□ 1.38
CIRBP-220ENST00000588917 UBE3CQ15386 1083 aa23.66■■□□□ 1.38
CIRBP-220ENST00000588917 TMOD2Q9NZR1 351 aa23.66■■□□□ 1.38
CIRBP-220ENST00000588917 PITPNM2Q9BZ72 1349 aa23.65■■□□□ 1.38
CIRBP-220ENST00000588917 PLCG2P16885 1265 aa23.65■■□□□ 1.38
CIRBP-220ENST00000588917 FSD1Q9BTV5 496 aa23.65■■□□□ 1.38
CIRBP-220ENST00000588917 ADAMTSL1Q8N6G6 1762 aa23.65■■□□□ 1.38
CIRBP-220ENST00000588917 PDE6AP16499 860 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 ADD2P35612 726 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 PPP4CP60510 307 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 TTC22Q5TAA0 569 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 ZNF384Q8TF68 577 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 RILPL2Q969X0 211 aa23.64■■□□□ 1.37
CIRBP-220ENST00000588917 TDRD3Q9H7E2 651 aaKnown RBP23.64■■□□□ 1.37
CIRBP-220ENST00000588917 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 RNF113AO15541 343 aaKnown RBP23.63■■□□□ 1.37
CIRBP-220ENST00000588917 BTDP43251 543 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 TNFAIP1Q13829 316 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 DEFB115Q30KQ5 88 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 ANGEL2Q5VTE6 544 aaKnown RBP23.63■■□□□ 1.37
CIRBP-220ENST00000588917 FKBP1CQ5VVH2 108 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 CDC37L1Q7L3B6 337 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 APOBEC3FQ8IUX4 373 aaKnown RBP23.63■■□□□ 1.37
CIRBP-220ENST00000588917 USP40Q9NVE5 1235 aa23.63■■□□□ 1.37
CIRBP-220ENST00000588917 ZNF70Q9UC06 446 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-220ENST00000588917 ZNF532Q9HCE3 1301 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 FOXN1O15353 648 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 TNNI2P48788 182 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 SPDYE2Q495Y8 402 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 SULF1Q8IWU6 871 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 AIDAQ96BJ3 306 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 PCDHAC2Q9Y5I4 1007 aa23.62■■□□□ 1.37
CIRBP-220ENST00000588917 CDC42EP5Q6NZY7 148 aa23.61■■□□□ 1.37
CIRBP-220ENST00000588917 GGA3Q9NZ52 723 aa23.61■■□□□ 1.37
CIRBP-220ENST00000588917 TCRBV5S4A2TA0A5A2 114 aa23.6■■□□□ 1.37
CIRBP-220ENST00000588917 HIP1O00291 1037 aa23.6■■□□□ 1.37
CIRBP-220ENST00000588917 RGS3P49796 1198 aa23.6■■□□□ 1.37
CIRBP-220ENST00000588917 ABT1Q9ULW3 272 aaKnown RBP23.6■■□□□ 1.37
CIRBP-220ENST00000588917 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
CIRBP-220ENST00000588917 MAGEB6P1A0A0J9YX57 407 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 CLRN2A0PK11 232 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 CTCFP49711 727 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-220ENST00000588917 APPBP2Q92624 585 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 VEZTQ9HBM0 779 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 PRDM10Q9NQV6 1147 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 WBP1LQ9NX94 342 aa23.59■■□□□ 1.37
CIRBP-220ENST00000588917 AATFQ9NY61 560 aaKnown RBP eCLIP23.59■■□□□ 1.37
CIRBP-220ENST00000588917 RFX7Q2KHR2 1363 aa23.58■■□□□ 1.37
CIRBP-220ENST00000588917 KRT26Q7Z3Y9 468 aa23.58■■□□□ 1.37
CIRBP-220ENST00000588917 FAM83AQ86UY5 434 aa23.58■■□□□ 1.37
CIRBP-220ENST00000588917 IDI2Q9BXS1 227 aa23.58■■□□□ 1.37
CIRBP-220ENST00000588917 PPP2R3BQ9Y5P8 575 aa23.58■■□□□ 1.37
CIRBP-220ENST00000588917 DOCK2Q92608 1830 aa23.57■■□□□ 1.36
CIRBP-220ENST00000588917 NPM3O75607 178 aaKnown RBP23.57■■□□□ 1.36
CIRBP-220ENST00000588917 GSPT1P15170 499 aaKnown RBP23.57■■□□□ 1.36
CIRBP-220ENST00000588917 SDSP20132 328 aa23.57■■□□□ 1.36
CIRBP-220ENST00000588917 ADGRA1Q86SQ6 560 aa23.57■■□□□ 1.36
CIRBP-220ENST00000588917 ASTN2O75129 1339 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-220ENST00000588917 WDR33Q9C0J8 1336 aaKnown RBP23.57■■□□□ 1.36
CIRBP-220ENST00000588917 RHBDL3P58872 404 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 BMP2KLQ5H9B9 411 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 USP48Q86UV5 1035 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 TEX11Q8IYF3 940 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 MIGA1Q8NAN2 632 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 DEFB129Q9H1M3 183 aa23.56■■□□□ 1.36
CIRBP-220ENST00000588917 MAST2Q6P0Q8 1798 aa23.55■■□□□ 1.36
CIRBP-220ENST00000588917 MYH2Q9UKX2 1941 aa23.55■■□□□ 1.36
CIRBP-220ENST00000588917 ENTPD3O75355 529 aa23.55■■□□□ 1.36
CIRBP-220ENST00000588917 RIOK1Q9BRS2 568 aaKnown RBP23.55■■□□□ 1.36
CIRBP-220ENST00000588917 HELLSQ9NRZ9 838 aa23.55■■□□□ 1.36
CIRBP-220ENST00000588917 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
CIRBP-220ENST00000588917 MAP2K1Q02750 393 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-220ENST00000588917 FMR1Q06787 632 aaKnown RBP eCLIP23.54■■□□□ 1.361e-8■□□□□ 9.5
CIRBP-220ENST00000588917 RASA3Q14644 834 aa23.54■■□□□ 1.36
CIRBP-220ENST00000588917 ZMYM1Q5SVZ6 1142 aa23.54■■□□□ 1.36
CIRBP-220ENST00000588917 SH3RF3Q8TEJ3 882 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-220ENST00000588917 FAM151AQ8WW52 585 aa23.54■■□□□ 1.36
CIRBP-220ENST00000588917 CRNKL1Q9BZJ0 848 aaKnown RBP23.54■■□□□ 1.36
CIRBP-220ENST00000588917 DYNLL1P63167 89 aaKnown RBP23.53■■□□□ 1.36
CIRBP-220ENST00000588917 SUPT20HL1Q3ZLR7 823 aa23.53■■□□□ 1.36
CIRBP-220ENST00000588917 CST9Q5W186 159 aa23.53■■□□□ 1.36
CIRBP-220ENST00000588917 HOOK2Q96ED9 719 aa23.53■■□□□ 1.36
CIRBP-220ENST00000588917 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-220ENST00000588917 PUS7LQ9H0K6 701 aaKnown RBP23.53■■□□□ 1.36
CIRBP-220ENST00000588917 DIAPH3Q9NSV4 1193 aa23.53■■□□□ 1.36
CIRBP-220ENST00000588917 TRAF5O00463 557 aa23.52■■□□□ 1.36
CIRBP-220ENST00000588917 WDHD1O75717 1129 aaPredicted RBP23.52■■□□□ 1.36
CIRBP-220ENST00000588917 GNAT2P19087 354 aa23.52■■□□□ 1.36
CIRBP-220ENST00000588917 USP5P45974 858 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms