RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 PUS7LQ9H0K6 701 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 AATFQ9NY61 560 aaKnown RBP eCLIP20.36■□□□□ 0.855e-6■■□□□ 11.7
SCAMP4-211ENST00000588907 TMOD2Q9NZR1 351 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 HACL1Q9UJ83 578 aa20.36■□□□□ 0.85
SCAMP4-211ENST00000588907 GPAA1O43292 621 aa20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 MBD4O95243 580 aa20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 KIF4BQ2VIQ3 1234 aa20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 APOBEC3HQ6NTF7 200 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 MIGA1Q8NAN2 632 aa20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 RIOK1Q9BRS2 568 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-211ENST00000588907 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
SCAMP4-211ENST00000588907 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-211ENST00000588907 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
SCAMP4-211ENST00000588907 M0R2C6 588 aa20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 PNMA8AQ86V59 439 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 ZBED3Q96IU2 234 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 STRBPQ96SI9 672 aaKnown RBP20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
SCAMP4-211ENST00000588907 ADAMTSL1Q8N6G6 1762 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 NPM3O75607 178 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 FKBP1CQ5VVH2 108 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 GIMAP6Q6P9H5 292 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 LCORLQ8N3X6 602 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 SEC62Q99442 399 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 ATP8A2Q9NTI2 1148 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 USP40Q9NVE5 1235 aa20.32■□□□□ 0.84
SCAMP4-211ENST00000588907 WNT10BO00744 389 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 CHGBP05060 677 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 EPHX2P34913 555 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 EPS15P42566 896 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 TNFAIP1Q13829 316 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 C8orf34Q49A92 452 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 CDC42EP5Q6NZY7 148 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 TEX11Q8IYF3 940 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 PRMT6Q96LA8 375 aaPredicted RBP20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
SCAMP4-211ENST00000588907 ZMYM6O95789 1325 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 PATL2C9JE40 543 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 RHBDL3P58872 404 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 TBC1D10BQ4KMP7 808 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 SAMD7Q7Z3H4 446 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 ZNF589Q86UQ0 364 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 ZC3H15Q8WU90 426 aaKnown RBP20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 IDI2Q9BXS1 227 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 SLC4A4Q9Y6R1 1079 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 FOCADQ5VW36 1801 aa20.3■□□□□ 0.84
SCAMP4-211ENST00000588907 PITPNM2Q9BZ72 1349 aa20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 USP5P45974 858 aa20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 DYNLL1P63167 89 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
SCAMP4-211ENST00000588907 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 HSPD1P10809 573 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 TNNI2P48788 182 aa20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 RBM26Q5T8P6 1007 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 CCDC129Q6ZRS4 1044 aa20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 TDRD3Q9H7E2 651 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 CTNNA3Q9UI47 895 aa20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 COL2A1P02458 1487 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-211ENST00000588907 ENTPD3O75355 529 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 APPP05067 770 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 ALX1Q15699 326 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 NBPF9Q3BBW0 867 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 FAM83AQ86UY5 434 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 TRPM4Q8TD43 1214 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 ZNF70Q9UC06 446 aaPredicted RBP20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 TAOK2Q9UL54 1235 aa20.27■□□□□ 0.84
SCAMP4-211ENST00000588907 CDK5RAP2Q96SN8 1893 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 WDHD1O75717 1129 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 TGFBRAP1Q8WUH2 860 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 NAPBQ9H115 298 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 IL25Q9H293 177 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 ARPP21Q9UBL0 812 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 PPP2R3BQ9Y5P8 575 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 FLT1P17948 1338 aa20.26■□□□□ 0.83
SCAMP4-211ENST00000588907 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 EGFRP00533 1210 aa20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 TDO2P48775 406 aa20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 DHX36Q9H2U1 1008 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 VEZTQ9HBM0 779 aa20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 DCP1AQ9NPI6 582 aaPredicted RBP20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 PCDHAC2Q9Y5I4 1007 aa20.25■□□□□ 0.83
SCAMP4-211ENST00000588907 CLRN2A0PK11 232 aa20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 MCCP23508 829 aa20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 IFNL3Q8IZI9 196 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms