RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
SMAD4-205ENST00000588745 CHMP5Q9NZZ3 219 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
SMAD4-205ENST00000588745 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
SMAD4-205ENST00000588745 ECE2O60344 883 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.25
SMAD4-205ENST00000588745 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
SMAD4-205ENST00000588745 CERS3Q8IU89 383 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
SMAD4-205ENST00000588745 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
SMAD4-205ENST00000588745 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
SMAD4-205ENST00000588745 SCN9AQ15858 1988 aa13.52□□□□□ -0.25
SMAD4-205ENST00000588745 PSME4Q14997 1843 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
SMAD4-205ENST00000588745 LARGE1O95461 756 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 BAG3O95817 575 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
SMAD4-205ENST00000588745 AOC3Q16853 763 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 Q6ZUG5 572 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 PSMD1Q99460 953 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
SMAD4-205ENST00000588745 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
SMAD4-205ENST00000588745 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 GAKO14976 1311 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 DDX60LQ5H9U9 1706 aaKnown RBP13.51□□□□□ -0.25
SMAD4-205ENST00000588745 CDK5RAP2Q96SN8 1893 aa13.51□□□□□ -0.25
SMAD4-205ENST00000588745 PPIP5K2O43314 1243 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 PTGER2P43116 358 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 PPP4CP60510 307 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 PPARAQ07869 468 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 TRDNQ13061 729 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 CERS5Q8N5B7 392 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
SMAD4-205ENST00000588745 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 TPCN1Q9ULQ1 816 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 NEDD4P46934 1319 aa13.5□□□□□ -0.25
SMAD4-205ENST00000588745 ADAMTSL1Q8N6G6 1762 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 MCM5P33992 734 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 BTDP43251 543 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FKBP1AP62942 108 aaKnown RBP13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FGD1P98174 961 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 ME3Q16798 604 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 AKNAD1Q5T1N1 836 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FBXL16Q8N461 479 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 BRF1Q92994 677 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
SMAD4-205ENST00000588745 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
SMAD4-205ENST00000588745 ARPP21Q9UBL0 812 aaPredicted RBP13.49□□□□□ -0.25
SMAD4-205ENST00000588745 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
SMAD4-205ENST00000588745 PRC1O43663 620 aa13.48□□□□□ -0.25
SMAD4-205ENST00000588745 ANTXR2P58335 489 aa13.48□□□□□ -0.25
SMAD4-205ENST00000588745 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
SMAD4-205ENST00000588745 DALRD3Q5D0E6 543 aaKnown RBP13.48□□□□□ -0.25
SMAD4-205ENST00000588745 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
SMAD4-205ENST00000588745 SH3RF3Q8TEJ3 882 aaPredicted RBP13.48□□□□□ -0.25
SMAD4-205ENST00000588745 RNF41Q9H4P4 317 aaPredicted RBP13.48□□□□□ -0.25
SMAD4-205ENST00000588745 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
SMAD4-205ENST00000588745 COL4A5P29400 1685 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 PLCG2P16885 1265 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 MFSD6Q6ZSS7 791 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 KRT23Q9C075 422 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
SMAD4-205ENST00000588745 TTF2Q9UNY4 1162 aaKnown RBP13.47□□□□□ -0.25
SMAD4-205ENST00000588745 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
SMAD4-205ENST00000588745 TACC3Q9Y6A5 838 aa13.47□□□□□ -0.25
SMAD4-205ENST00000588745 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 B4E1Z4 1266 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
SMAD4-205ENST00000588745 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
SMAD4-205ENST00000588745 USP5P45974 858 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 RAB3GAP1Q15042 981 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 SBK1Q52WX2 424 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms