RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 BRINP3Q76B58 766 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 VPS37DQ86XT2 251 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 GREM2Q9H772 168 aa16.44■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MAP3K15Q6ZN16 1313 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 KCNJ6P48051 423 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 APOA5Q6Q788 366 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 KIF18AQ8NI77 898 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 HPSEQ9Y251 543 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SYKP43405 635 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 E4F1Q66K89 784 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 KRT40Q6A162 431 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TMC6Q7Z403 805 aa16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PTPAQ15257 358 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PIH1D3Q9NQM4 214 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 OGFRQ9NZT2 677 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ANKRD18BA2A2Z9 1011 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SFPQP23246 707 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CDC27P30260 824 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ASAP1Q9ULH1 1129 aa16.42■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 IDH1O75874 414 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 STARD3NLO95772 234 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 APPP05067 770 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CTSWP56202 376 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 HLFQ16534 295 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 HSD3B7Q9H2F3 369 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ZNF532Q9HCE3 1301 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 B4E1Z4 1266 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PDE8BO95263 885 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 RXRAP19793 462 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 NTRK3Q16288 839 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PHKBQ93100 1093 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PDE6AP16499 860 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 GPTP24298 496 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 FANCCQ00597 558 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 SGMS1Q86VZ5 419 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ERO1AQ96HE7 468 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ZBTB43O43298 467 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MICU3Q86XE3 530 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PIGBQ92521 554 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-237ENST00000585163 MYH3P11055 1940 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ALX1Q15699 326 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 RESP18Q5W5W9 173 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LY9Q9HBG7 655 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 NRDCO43847 1150 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PHKA1P46020 1223 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 WWC3Q9ULE0 1092 aa16.39■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 RANBP6O60518 1105 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 SLU7O95391 586 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TUBB4AP04350 444 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 LIFRP42702 1097 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 MYL5Q02045 173 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 ZNF397Q8NF99 534 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK5RAP3-237ENST00000585163 GOLGA8AA7E2F4 631 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TULP1O00294 542 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 CUTAO60888 179 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 PNOCQ13519 176 aa16.37■□□□□ 0.21
CDK5RAP3-237ENST00000585163 TRIM29Q14134 588 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms