RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
CDK5RAP3-230ENST00000584042 FOXP2O15409 715 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 HSPD1P10809 573 aaKnown RBP20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 PLCG2P16885 1265 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MCCP23508 829 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 BTDP43251 543 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 CRKP46108 304 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 RBM25P49756 843 aaKnown RBP20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 MAP4K1Q92918 833 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 C22orf23Q9BZE7 217 aa20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-230ENST00000584042 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ZDHHC15Q96MV8 337 aa20.01■□□□□ 0.79
CDK5RAP3-230ENST00000584042 CRNKL1Q9BZJ0 848 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-230ENST00000584042 SCNN1DP51172 638 aa20■□□□□ 0.79
CDK5RAP3-230ENST00000584042 DYNLL1P63167 89 aaKnown RBP20■□□□□ 0.79
CDK5RAP3-230ENST00000584042 C9orf131Q5VYM1 1079 aa20■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
CDK5RAP3-230ENST00000584042 RBM8AQ9Y5S9 174 aaKnown RBP20■□□□□ 0.79
CDK5RAP3-230ENST00000584042 USP17L8P0C7I0 530 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 HSPA4P34932 840 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ALX1Q15699 326 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 GPC2Q8N158 579 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 OGFOD1Q8N543 542 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 DPF2Q92785 391 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 SLC4A4Q9Y6R1 1079 aa19.99■□□□□ 0.79
CDK5RAP3-230ENST00000584042 PATL2C9JE40 543 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 RHBDL3P58872 404 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ANAPC15P60006 121 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 GIMAP6Q6P9H5 292 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 MTMR14Q8NCE2 650 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 NACAP1Q9BZK3 213 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 TSHZ2Q9NRE2 1034 aa19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 BAZ2AQ9UIF9 1905 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-230ENST00000584042 GSG1L2A8MUP6 293 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 GMPSP49915 693 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ZNF280AP59817 542 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 NECTIN1Q15223 517 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 CFAP100Q494V2 611 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 APOBEC3HQ6NTF7 200 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 IL17RAQ96F46 866 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 ATP8A2Q9NTI2 1148 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
CDK5RAP3-230ENST00000584042 RNF20Q5VTR2 975 aa19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 SH3RF3Q8TEJ3 882 aaPredicted RBP19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 SDR42E1Q8WUS8 393 aa19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 KCNB2Q92953 911 aa19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 NAPBQ9H115 298 aa19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 GJA3Q9Y6H8 435 aa19.96■□□□□ 0.79
CDK5RAP3-230ENST00000584042 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 PRKAB2O43741 272 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 CREB3L3Q68CJ9 461 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 TEX11Q8IYF3 940 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 IFNL3Q8IZI9 196 aa19.95■□□□□ 0.78
CDK5RAP3-230ENST00000584042 MYH1P12882 1939 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SLC27A2O14975 620 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 FGAP02671 866 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 APPP05067 770 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 TDO2P48775 406 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 RBM5P52756 815 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 CDC42EP5Q6NZY7 148 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 ZBED3Q96IU2 234 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 DCP1AQ9NPI6 582 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 FLT1P17948 1338 aa19.94■□□□□ 0.78
CDK5RAP3-230ENST00000584042 COL2A1P02458 1487 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 USP5P45974 858 aa19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 DLGAP5Q15398 846 aa19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 IMMTQ16891 758 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 MICALL2Q8IY33 904 aa19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 MYOZ2Q9NPC6 264 aa19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 ARPP21Q9UBL0 812 aaPredicted RBP19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 MKRN1Q9UHC7 482 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
CDK5RAP3-230ENST00000584042 NPM3O75607 178 aaKnown RBP19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 WDHD1O75717 1129 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 CYP21A2P08686 494 aa19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 ZKSCAN1P17029 563 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 TSGA10IPQ3SY00 556 aa19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 GPRC5DQ9NZD1 345 aa19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 PCDHAC2Q9Y5I4 1007 aa19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 WDR90Q96KV7 1748 aa19.92■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SCN4AP35499 1836 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 TGFBRAP1Q8WUH2 860 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 IDI2Q9BXS1 227 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 USP40Q9NVE5 1235 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SNX14Q9Y5W7 946 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 ROBO3Q96MS0 1386 aa19.91■□□□□ 0.78
CDK5RAP3-230ENST00000584042 KRT32Q14532 448 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SPDYE2Q495Y8 402 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SBK1Q52WX2 424 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 RASEFQ8IZ41 740 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 KIF2CQ99661 725 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 CNOT7Q9UIV1 285 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-230ENST00000584042 UTRNP46939 3433 aa19.89■□□□□ 0.78
CDK5RAP3-230ENST00000584042 SHTN1A0MZ66 631 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms