RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 AP4E1Q9UPM8 1137 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 ACTL7BQ9Y614 415 aa6.85□□□□□ -1.31
PPP4R1-227ENST00000583988 PRPF40AO75400 957 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 ITGAEP38570 1179 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 PTPN12Q05209 780 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 FAAP100Q0VG06 881 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 FRMD6Q96NE9 622 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 YIPF2Q9BWQ6 316 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 BCO2Q9BYV7 579 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 ATG3Q9NT62 314 aa6.84□□□□□ -1.31
PPP4R1-227ENST00000583988 AP3B2Q13367 1082 aa6.83□□□□□ -1.32
PPP4R1-227ENST00000583988 GIMAP7Q8NHV1 300 aa6.83□□□□□ -1.32
PPP4R1-227ENST00000583988 OSBPL7Q9BZF2 842 aa6.83□□□□□ -1.32
PPP4R1-227ENST00000583988 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
PPP4R1-227ENST00000583988 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 AOC2O75106 756 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 F13BP05160 661 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 NFICP08651 508 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 ZNF326Q5BKZ1 582 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 RPS26P11Q5JNZ5 115 aaPredicted RBP6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 INTS5Q6P9B9 1019 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 SHISA5Q8N114 240 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 TBC1D32Q96NH3 1257 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 DUSP9Q99956 384 aaKnown RBP6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 OSBPL1AQ9BXW6 950 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 SRCIN1Q9C0H9 1055 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 BCL11AQ9H165 835 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 FAM105AQ9NUU6 356 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 SPG7Q9UQ90 795 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 AKAP2Q9Y2D5 859 aa6.82□□□□□ -1.32
PPP4R1-227ENST00000583988 KIAA1324LA8MWY0 1029 aaPredicted RBP6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 GNA15P30679 374 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 ASPAP45381 313 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 BCL2L13Q9BXK5 485 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 LGR6Q9HBX8 967 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 LEMD3Q9Y2U8 911 aa6.81□□□□□ -1.32
PPP4R1-227ENST00000583988 XRCC5P13010 732 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 LIG1P18858 919 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 HOXA10P31260 410 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 ADMP35318 185 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 PPP2R3AQ06190 1150 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 EZH1Q92800 747 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 WDR89Q96FK6 387 aaPredicted RBP6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 SEMA6CQ9H3T2 930 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 CCDC86Q9H6F5 360 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 RNF19AQ9NV58 838 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 PRKAG2Q9UGJ0 569 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 PARP2Q9UGN5 583 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 PPP1R9AQ9ULJ8 1098 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
PPP4R1-227ENST00000583988 SPINK2P20155 84 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 DAB2P98082 770 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 MAP7Q14244 749 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 TMEM39AQ9NV64 488 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
PPP4R1-227ENST00000583988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 FAM170BA6NMN3 283 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 ADAMTS4O75173 837 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 GSTP1P09211 210 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 GP2P55259 537 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 TMC4Q7Z404 712 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 DTX1Q86Y01 620 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 C3orf58Q8NDZ4 430 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 KCNB2Q92953 911 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 FAM8A1Q9UBU6 413 aa6.78□□□□□ -1.32
PPP4R1-227ENST00000583988 DYNC1LI2O43237 492 aaPredicted RBP6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 SLFN14P0C7P3 912 aa6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 GSTT1P30711 240 aa6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 METTL22Q9BUU2 404 aaPredicted RBP6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 LRRC4CQ9HCJ2 640 aa6.77□□□□□ -1.33
PPP4R1-227ENST00000583988 CYP26A1O43174 497 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 ZNF862O60290 1169 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 WNT11O96014 354 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 FOSL1P15407 271 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 EIF4BP23588 611 aaKnown RBP6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 SULF2Q8IWU5 870 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 GIPC2Q8TF65 315 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 PIDD1Q9HB75 910 aa6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 OAS3Q9Y6K5 1087 aaKnown RBP6.76□□□□□ -1.33
PPP4R1-227ENST00000583988 TMPRSS2O15393 492 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 ID3Q02535 119 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 PSMD2Q13200 908 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 DUSP27Q5VZP5 1158 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 MAP1SQ66K74 1059 aaPredicted RBP6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 TPTE2Q6XPS3 522 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms