RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 TRIOBPQ9H2D6 2365 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 A0A0C4DFX4 3053 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 TCP10L2B9ZVM9 353 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 BTBD19C9JJ37 291 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 GJB1P08034 283 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 GJA8P48165 433 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 GCKRQ14397 625 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 TRIM47Q96LD4 638 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
CCDC47-205ENST00000582331 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
CCDC47-205ENST00000582331 OTOFQ9HC10 1997 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 COL6A3P12111 3177 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 A0A1W2PPC1 479 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 ZBTB7BO15156 539 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-205ENST00000582331 CCL5P13501 91 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 GRK4P32298 578 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 PSMC4P43686 418 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 CASP7P55210 303 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 SNAPC2Q13487 334 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 LCE2DQ5TA82 110 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-205ENST00000582331 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 UBE2Q1Q7Z7E8 422 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 ERO1BQ86YB8 467 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
CCDC47-205ENST00000582331 RAET1EQ8TD07 263 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 STK31Q9BXU1 1019 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-205ENST00000582331 SRRDQ9UH36 339 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 RIPOR2Q9Y4F9 1068 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 FAM205AQ6ZU69 1335 aa9.72□□□□□ -0.85
CCDC47-205ENST00000582331 RANBP2P49792 3224 aaKnown RBP9.72□□□□□ -0.85
CCDC47-205ENST00000582331 CEP290O15078 2479 aa9.71□□□□□ -0.85
CCDC47-205ENST00000582331 PLIN1O60240 522 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 FMNL1O95466 1100 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-205ENST00000582331 OSBPP22059 807 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 CRKP46108 304 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 UBXN2AP68543 259 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 IFIT5Q13325 482 aaKnown RBP9.71□□□□□ -0.86
CCDC47-205ENST00000582331 MFSD14BQ5SR56 506 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 RNF208Q9H0X6 261 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 MYH16Q9H6N6 1097 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 CPA4Q9UI42 421 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 SNCAIPQ9Y6H5 919 aa9.71□□□□□ -0.86
CCDC47-205ENST00000582331 MYBBP1AQ9BQG0 1328 aaKnown RBP9.71□□□□□ -0.86
CCDC47-205ENST00000582331 ZSWIM8A7E2V4 1837 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 IRF6O14896 467 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 FARP2O94887 1054 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-205ENST00000582331 CTGFP29279 349 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 PPIL2Q13356 520 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 G2E3Q7L622 706 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 TDRD7Q8NHU6 1098 aaKnown RBP9.7□□□□□ -0.86
CCDC47-205ENST00000582331 ZKSCAN4Q969J2 545 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-205ENST00000582331 WRNIP1Q96S55 665 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 CHMP3Q9Y3E7 222 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 MYPNQ86TC9 1320 aa9.7□□□□□ -0.86
CCDC47-205ENST00000582331 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-205ENST00000582331 SOX1O00570 391 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-205ENST00000582331 APAF1O14727 1248 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 EVI5O60447 810 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 HIBADHP31937 336 aaKnown RBP9.69□□□□□ -0.86
CCDC47-205ENST00000582331 LDHAL6AQ6ZMR3 332 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 ANKRD23Q86SG2 305 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
CCDC47-205ENST00000582331 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 CNNM1Q9NRU3 951 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 STAP2Q9UGK3 403 aa9.69□□□□□ -0.86
CCDC47-205ENST00000582331 PDHXO00330 501 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 SGPL1O95470 568 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 CAPN2P17655 700 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 GYG1P46976 350 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 FOXO4P98177 505 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 HDLBPQ00341 1268 aaKnown RBP9.68□□□□□ -0.86
CCDC47-205ENST00000582331 PPATQ06203 517 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 TAF7LQ5H9L4 462 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.68□□□□□ -0.86
CCDC47-205ENST00000582331 LINS1Q8NG48 757 aa9.68□□□□□ -0.86
CCDC47-205ENST00000582331 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
CCDC47-205ENST00000582331 CACNB3P54284 484 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 FCGRTP55899 365 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 PRKCZQ05513 592 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 CCDC57Q2TAC2 916 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 DCAF15Q66K64 600 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 FAM83AQ86UY5 434 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 DNAAF4Q8WXU2 420 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 ZNF594Q96JF6 807 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-205ENST00000582331 FAM84BQ96KN1 310 aaPredicted RBP9.67□□□□□ -0.86
CCDC47-205ENST00000582331 ZNF341Q9BYN7 854 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 UNC93B1Q9H1C4 597 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 TMOD2Q9NZR1 351 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 ARAP2Q8WZ64 1704 aa9.67□□□□□ -0.86
CCDC47-205ENST00000582331 ADGRA2Q96PE1 1338 aa9.66□□□□□ -0.86
CCDC47-205ENST00000582331 ST18O60284 1047 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms