RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RBM47A0AV96 593 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 CYP26A1O43174 497 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 TIAF1O95411 115 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 IGHA2P01877 340 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 ADH5P11766 374 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 TAGLNQ01995 201 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 ZNF423Q2M1K9 1284 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 TCF12Q99081 682 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 NLRP2Q9NX02 1062 aa7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 OAS3Q9Y6K5 1087 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-205ENST00000581383 F13BP05160 661 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 P4HBP07237 508 aaKnown RBP7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 ZNF16P17020 682 aaPredicted RBP7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 ASPAP45381 313 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 MAPK8P45983 427 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 DSC3Q14574 896 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 EAPPQ56P03 285 aaPredicted RBP7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 KIAA0319Q5VV43 1072 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 FBXO33Q7Z6M2 555 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 LRRC4CQ9HCJ2 640 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 TRAK1Q9UPV9 953 aa7.93□□□□□ -1.14
SMCHD1-205ENST00000581383 NFICP08651 508 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 TAL1P17542 331 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 ZNF157P51786 506 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 DTHD1Q6ZMT9 781 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 DTX1Q86Y01 620 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 TP53INP2Q8IXH6 220 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 CCDC74AQ96AQ1 378 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 ZC3H12CQ9C0D7 883 aaKnown RBP7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 DAGLAQ9Y4D2 1042 aa7.92□□□□□ -1.14
SMCHD1-205ENST00000581383 EIF1AYO14602 144 aaKnown RBP7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 HOXA10P31260 410 aaPredicted RBP7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 CYP27A1Q02318 531 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 FMR1Q06787 632 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 COL19A1Q14993 1142 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 CPSF6Q16630 551 aaKnown RBP eCLIP7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 ALKBH8Q96BT7 664 aaKnown RBP7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 DNAJC25Q9H1X3 360 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 PIDD1Q9HB75 910 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 ACTL7BQ9Y614 415 aa7.91□□□□□ -1.14
SMCHD1-205ENST00000581383 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 B3GALT4O96024 378 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 SLFN14P0C7P3 912 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 FOSL1P15407 271 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 SPINK2P20155 84 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 PRKAG2Q9UGJ0 569 aa7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 GPN3Q9UHW5 284 aaPredicted RBP7.9□□□□□ -1.14
SMCHD1-205ENST00000581383 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.89□□□□□ -1.15
SMCHD1-205ENST00000581383 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
SMCHD1-205ENST00000581383 ZAR1Q86SH2 424 aa7.89□□□□□ -1.15
SMCHD1-205ENST00000581383 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 AOC2O75106 756 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 FCGRTP55899 365 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 WWC3Q9ULE0 1092 aa7.88□□□□□ -1.15
SMCHD1-205ENST00000581383 PNMA6FA0A0J9YX94 578 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 FAM170BA6NMN3 283 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 E9PSI1 815 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 RNGTTO60942 597 aaKnown RBP7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 ECEL1O95672 775 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 CTSBP07858 339 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 ADMP35318 185 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 ARHGAP27Q6ZUM4 889 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 EZH1Q92800 747 aaPredicted RBP7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 SSU72Q9NP77 194 aaKnown RBP7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 FAM105AQ9NUU6 356 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 RNF114Q9Y508 228 aa7.87□□□□□ -1.15
SMCHD1-205ENST00000581383 LIG1P18858 919 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 ITPKAP23677 461 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 RANGAP1P46060 587 aaPredicted RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 FLCNQ8NFG4 579 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 EPS8L3Q8TE67 593 aaKnown RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 KCNB2Q92953 911 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 FBXL18Q96ME1 805 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 TRIM56Q9BRZ2 755 aaKnown RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 SEMA6CQ9H3T2 930 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 AKAP2Q9Y2D5 859 aa7.86□□□□□ -1.15
SMCHD1-205ENST00000581383 ADAMTS4O75173 837 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 RPS26P11Q5JNZ5 115 aaPredicted RBP7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 ZNF765Q7L2R6 523 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 VSIG10LQ86VR7 867 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 SHISA5Q8N114 240 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 NRSN2Q9GZP1 204 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 ABCB6Q9NP58 842 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SMCHD1-205ENST00000581383 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 GRM2Q14416 872 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms