RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 MROH7-TTC4A0A0A0MT08 1334 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 MAST2Q6P0Q8 1798 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 SMARCA5O60264 1052 aaPredicted RBP24.65■■□□□ 1.54
SS18-218ENST00000581021 NF2P35240 595 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 TTLL12Q14166 644 aaPredicted RBP24.65■■□□□ 1.54
SS18-218ENST00000581021 RASAL3Q86YV0 1011 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 CLASRPQ8N2M8 674 aaKnown RBP24.65■■□□□ 1.54
SS18-218ENST00000581021 FAM163AQ96GL9 167 aaPredicted RBP24.65■■□□□ 1.54
SS18-218ENST00000581021 BCL11AQ9H165 835 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 DCTPP1Q9H773 170 aa24.65■■□□□ 1.54
SS18-218ENST00000581021 MYO5AQ9Y4I1 1855 aaKnown RBP24.65■■□□□ 1.54
SS18-218ENST00000581021 SLC10A3P09131 477 aa24.64■■□□□ 1.54
SS18-218ENST00000581021 ZNF157P51786 506 aaPredicted RBP24.64■■□□□ 1.54
SS18-218ENST00000581021 FKBP1CQ5VVH2 108 aa24.64■■□□□ 1.54
SS18-218ENST00000581021 FAM198AQ9UFP1 575 aa24.64■■□□□ 1.54
SS18-218ENST00000581021 LDLRAD1Q5T700 205 aa24.63■■□□□ 1.53
SS18-218ENST00000581021 USP40Q9NVE5 1235 aa24.63■■□□□ 1.53
SS18-218ENST00000581021 WBP1LQ9NX94 342 aa24.63■■□□□ 1.53
SS18-218ENST00000581021 RAI14Q9P0K7 980 aa24.63■■□□□ 1.53
SS18-218ENST00000581021 ANGEL1Q9UNK9 670 aaKnown RBP24.63■■□□□ 1.53
SS18-218ENST00000581021 BTDP43251 543 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 MAP3K11Q16584 847 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 SUPT20HL1Q3ZLR7 823 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 FAM83AQ86UY5 434 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 ZFPM1Q8IX07 1006 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 ANTXR1Q9H6X2 564 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 TMOD2Q9NZR1 351 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 LRP2BPQ9P2M1 347 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
SS18-218ENST00000581021 OTOFQ9HC10 1997 aa24.62■■□□□ 1.53
SS18-218ENST00000581021 GPR75-ASB3A0A0A6YYF3 556 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 USP2O75604 605 aaPredicted RBP24.61■■□□□ 1.53
SS18-218ENST00000581021 TNNI2P48788 182 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 RHBDL3P58872 404 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 ADGRA1Q86SQ6 560 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 CLMNQ96JQ2 1002 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 LRRCC1Q9C099 1032 aa24.61■■□□□ 1.53
SS18-218ENST00000581021 RPAP1Q9BWH6 1393 aaPredicted RBP24.61■■□□□ 1.53
SS18-218ENST00000581021 WDHD1O75717 1129 aaPredicted RBP24.6■■□□□ 1.53
SS18-218ENST00000581021 IFIT2P09913 472 aaKnown RBP24.6■■□□□ 1.53
SS18-218ENST00000581021 MAP2K2P36507 400 aa24.6■■□□□ 1.53
SS18-218ENST00000581021 TCP10Q12799 353 aa24.6■■□□□ 1.53
SS18-218ENST00000581021 NOGQ13253 232 aa24.6■■□□□ 1.53
SS18-218ENST00000581021 ARMC9Q7Z3E5 817 aa24.6■■□□□ 1.53
SS18-218ENST00000581021 DOCK2Q92608 1830 aa24.59■■□□□ 1.53
SS18-218ENST00000581021 FOXN1O15353 648 aa24.59■■□□□ 1.53
SS18-218ENST00000581021 CCDC102AQ96A19 550 aa24.59■■□□□ 1.53
SS18-218ENST00000581021 DDX4Q9NQI0 724 aaKnown RBP24.59■■□□□ 1.53
SS18-218ENST00000581021 SLF2Q8IX21 1173 aa24.58■■□□□ 1.53
SS18-218ENST00000581021 EXOC6Q8TAG9 804 aa24.58■■□□□ 1.53
SS18-218ENST00000581021 IDI2Q9BXS1 227 aa24.58■■□□□ 1.53
SS18-218ENST00000581021 PPP1R12BO60237 982 aaPredicted RBP24.57■■□□□ 1.52
SS18-218ENST00000581021 RGS3P49796 1198 aa24.57■■□□□ 1.52
SS18-218ENST00000581021 KIF23Q02241 960 aaPredicted RBP24.57■■□□□ 1.52
SS18-218ENST00000581021 FAM151AQ8WW52 585 aa24.57■■□□□ 1.52
SS18-218ENST00000581021 EDC3Q96F86 508 aaKnown RBP24.57■■□□□ 1.52
SS18-218ENST00000581021 ATRNL1Q5VV63 1379 aa24.56■■□□□ 1.52
SS18-218ENST00000581021 GSTO1P78417 241 aa24.56■■□□□ 1.52
SS18-218ENST00000581021 NAA16Q6N069 864 aaPredicted RBP24.56■■□□□ 1.52
SS18-218ENST00000581021 SH3BP5LQ7L8J4 393 aa24.56■■□□□ 1.52
SS18-218ENST00000581021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.56■■□□□ 1.52
SS18-218ENST00000581021 IDH1O75874 414 aaKnown RBP24.55■■□□□ 1.52
SS18-218ENST00000581021 MAP2K1Q02750 393 aaPredicted RBP24.55■■□□□ 1.52
SS18-218ENST00000581021 LDHCP07864 332 aa24.54■■□□□ 1.52
SS18-218ENST00000581021 IREB2P48200 963 aaKnown RBP24.54■■□□□ 1.52
SS18-218ENST00000581021 MKRN3Q13064 507 aaKnown RBP24.54■■□□□ 1.52
SS18-218ENST00000581021 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.54■■□□□ 1.52
SS18-218ENST00000581021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.54■■□□□ 1.52
SS18-218ENST00000581021 SH3RF3Q8TEJ3 882 aaPredicted RBP24.54■■□□□ 1.52
SS18-218ENST00000581021 SLURP2P0DP57 97 aa24.53■■□□□ 1.52
SS18-218ENST00000581021 ATP5JP18859 108 aa24.53■■□□□ 1.52
SS18-218ENST00000581021 DNAJC2Q99543 621 aaKnown RBP24.53■■□□□ 1.52
SS18-218ENST00000581021 AATFQ9NY61 560 aaKnown RBP eCLIP24.53■■□□□ 1.52
SS18-218ENST00000581021 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
SS18-218ENST00000581021 GOLIM4O00461 696 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 ENTPD3O75355 529 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 GJA5P36382 358 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 PICALMQ13492 652 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 HDAC1Q13547 482 aaPredicted RBP24.52■■□□□ 1.52
SS18-218ENST00000581021 TSHZ3Q63HK5 1081 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 MIGA2Q7L4E1 593 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 OTUD7AQ8TE49 926 aaPredicted RBP24.52■■□□□ 1.52
SS18-218ENST00000581021 CSRNP1Q96S65 589 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 BOLA2Q9H3K6 86 aa24.52■■□□□ 1.52
SS18-218ENST00000581021 DDTLA6NHG4 134 aaPredicted RBP24.51■■□□□ 1.51
SS18-218ENST00000581021 VGLL4Q14135 290 aa24.51■■□□□ 1.51
SS18-218ENST00000581021 SPRYD7Q5W111 196 aa24.51■■□□□ 1.51
SS18-218ENST00000581021 CNKSR2Q8WXI2 1034 aa24.51■■□□□ 1.51
SS18-218ENST00000581021 TSKSQ9UJT2 592 aa24.51■■□□□ 1.51
SS18-218ENST00000581021 HSPA8P11142 646 aaKnown RBP24.5■■□□□ 1.51
SS18-218ENST00000581021 CYP7A1P22680 504 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 PPP4CP60510 307 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 DYNLL1P63167 89 aaKnown RBP24.5■■□□□ 1.51
SS18-218ENST00000581021 IRX6P78412 446 aaPredicted RBP24.5■■□□□ 1.51
SS18-218ENST00000581021 ANKRD13AQ8IZ07 590 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 AIDAQ96BJ3 306 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 WNK4Q96J92 1243 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 HAUS7Q99871 368 aa24.5■■□□□ 1.51
SS18-218ENST00000581021 ELP3Q9H9T3 547 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms