RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 APBB1O00213 710 aa20.43■□□□□ 0.86
SREBF1-219ENST00000580540 ARID4AP29374 1257 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-219ENST00000580540 PDE3AQ14432 1141 aa20.43■□□□□ 0.86
SREBF1-219ENST00000580540 CDC42EP5Q6NZY7 148 aa20.43■□□□□ 0.86
SREBF1-219ENST00000580540 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
SREBF1-219ENST00000580540 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
SREBF1-219ENST00000580540 PDS5AQ29RF7 1337 aaKnown RBP20.43■□□□□ 0.86
SREBF1-219ENST00000580540 ZBTB22O15209 634 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 HMMRO75330 724 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 TRPA1O75762 1119 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 MCAMP43121 646 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 TCP10Q12799 353 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 MAP3K11Q16584 847 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 IFFO2Q5TF58 517 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 ERC1Q8IUD2 1116 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 SLF2Q8IX21 1173 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 RPAP2Q8IXW5 612 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-219ENST00000580540 RAI14Q9P0K7 980 aa20.42■□□□□ 0.86
SREBF1-219ENST00000580540 FKBP1CQ5VVH2 108 aa20.41■□□□□ 0.86
SREBF1-219ENST00000580540 FAM83AQ86UY5 434 aa20.41■□□□□ 0.86
SREBF1-219ENST00000580540 REM2Q8IYK8 340 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-219ENST00000580540 RNF186Q9NXI6 227 aa20.41■□□□□ 0.86
SREBF1-219ENST00000580540 MECOMQ03112 1051 aa20.4■□□□□ 0.86
SREBF1-219ENST00000580540 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
SREBF1-219ENST00000580540 SPRYD7Q5W111 196 aa20.4■□□□□ 0.86
SREBF1-219ENST00000580540 ANKRD13AQ8IZ07 590 aa20.4■□□□□ 0.86
SREBF1-219ENST00000580540 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
SREBF1-219ENST00000580540 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
SREBF1-219ENST00000580540 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
SREBF1-219ENST00000580540 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
SREBF1-219ENST00000580540 NFIAQ12857 509 aa20.39■□□□□ 0.85
SREBF1-219ENST00000580540 AACSQ86V21 672 aa20.39■□□□□ 0.85
SREBF1-219ENST00000580540 ELP3Q9H9T3 547 aa20.39■□□□□ 0.85
SREBF1-219ENST00000580540 IL1RAPL2Q9NP60 686 aa20.39■□□□□ 0.85
SREBF1-219ENST00000580540 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.85
SREBF1-219ENST00000580540 BTDP43251 543 aa20.38■□□□□ 0.85
SREBF1-219ENST00000580540 SIRT2Q8IXJ6 389 aa20.38■□□□□ 0.85
SREBF1-219ENST00000580540 FAM151AQ8WW52 585 aa20.38■□□□□ 0.85
SREBF1-219ENST00000580540 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
SREBF1-219ENST00000580540 MROH7-TTC4A0A0A0MT08 1334 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 GAKO14976 1311 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 UNCXA6NJT0 531 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 LDHCP07864 332 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 GSTO1P78417 241 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 MAP3K9P80192 1104 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 MIGA2Q7L4E1 593 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 RHPN1Q8TCX5 695 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 HOOK2Q96ED9 719 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 SAGE1Q9NXZ1 904 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
SREBF1-219ENST00000580540 AK9Q5TCS8 1911 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 CAPN15O75808 1086 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 DCAF15Q66K64 600 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 NSUN4Q96CB9 384 aaKnown RBP20.36■□□□□ 0.85
SREBF1-219ENST00000580540 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-219ENST00000580540 FAM198AQ9UFP1 575 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 CSADQ9Y600 493 aa20.36■□□□□ 0.85
SREBF1-219ENST00000580540 ZAP70P43403 619 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 TM4SF4P48230 202 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 RGS3P49796 1198 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 PICALMQ13492 652 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-219ENST00000580540 ZSCAN29Q8IWY8 852 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-219ENST00000580540 ZFPM1Q8IX07 1006 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 ZNF384Q8TF68 577 aa20.35■□□□□ 0.85
SREBF1-219ENST00000580540 MANSC4A6NHS7 340 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 VGLL4Q14135 290 aa20.34■□□□□ 0.85
SREBF1-219ENST00000580540 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 OPTNQ96CV9 577 aa20.34■□□□□ 0.85
SREBF1-219ENST00000580540 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
SREBF1-219ENST00000580540 ZNF512BQ96KM6 892 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-219ENST00000580540 WRNIP1Q96S55 665 aa20.34■□□□□ 0.85
SREBF1-219ENST00000580540 CASP8AP2Q9UKL3 1982 aa20.34■□□□□ 0.85
SREBF1-219ENST00000580540 GPR75-ASB3A0A0A6YYF3 556 aa20.33■□□□□ 0.85
SREBF1-219ENST00000580540 TBC1D8O95759 1140 aa20.33■□□□□ 0.85
SREBF1-219ENST00000580540 GJA5P36382 358 aa20.33■□□□□ 0.85
SREBF1-219ENST00000580540 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-219ENST00000580540 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
SREBF1-219ENST00000580540 ZKSCAN4Q969J2 545 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-219ENST00000580540 NOL10Q9BSC4 688 aaKnown RBP20.33■□□□□ 0.85
SREBF1-219ENST00000580540 ZNF341Q9BYN7 854 aa20.33■□□□□ 0.85
SREBF1-219ENST00000580540 RPAP1Q9BWH6 1393 aaPredicted RBP20.33■□□□□ 0.84
SREBF1-219ENST00000580540 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
SREBF1-219ENST00000580540 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
SREBF1-219ENST00000580540 IDI2Q9BXS1 227 aa20.32■□□□□ 0.84
SREBF1-219ENST00000580540 PIH1D3Q9NQM4 214 aaKnown RBP20.32■□□□□ 0.84
SREBF1-219ENST00000580540 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
SREBF1-219ENST00000580540 ENTPD3O75355 529 aa20.31■□□□□ 0.84
SREBF1-219ENST00000580540 WDHD1O75717 1129 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-219ENST00000580540 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
SREBF1-219ENST00000580540 OTUD5Q96G74 571 aa20.31■□□□□ 0.84
SREBF1-219ENST00000580540 IDH1O75874 414 aaKnown RBP20.3■□□□□ 0.84
SREBF1-219ENST00000580540 INHBEP58166 350 aa20.3■□□□□ 0.84
SREBF1-219ENST00000580540 RHBDL3P58872 404 aa20.3■□□□□ 0.84
SREBF1-219ENST00000580540 DDX4Q9NQI0 724 aaKnown RBP20.3■□□□□ 0.84
SREBF1-219ENST00000580540 OTOFQ9HC10 1997 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms