RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 VAMP4O75379 141 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 GJA8P48165 433 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 UBXN2AP68543 259 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 RBM27Q9P2N5 1060 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-216ENST00000579853 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 F6X3S4 739 aa15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 MTFR1Q15390 333 aa15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 BIN2Q9UBW5 565 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 RIPOR2Q9Y4F9 1068 aa15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 FANCIQ9NVI1 1328 aa15.4■□□□□ 0.06
CDK5RAP3-216ENST00000579853 PDHXO00330 501 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 OSBPP22059 807 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CACNB3P54284 484 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 HHIPL2Q6UWX4 724 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 RNF208Q9H0X6 261 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 MYPNQ86TC9 1320 aa15.39■□□□□ 0.05
CDK5RAP3-216ENST00000579853 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CCL5P13501 91 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 APOBEC3HQ6NTF7 200 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 PARK7Q99497 189 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 PUS3Q9BZE2 481 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 SRCIN1Q9C0H9 1055 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CPA4Q9UI42 421 aa15.38■□□□□ 0.05
CDK5RAP3-216ENST00000579853 FCGRTP55899 365 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 GRIK5Q16478 980 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 FAM151AQ8WW52 585 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 IQSEC3Q9UPP2 1182 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 KIF16BQ96L93 1317 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 ADGRA2Q96PE1 1338 aa15.37■□□□□ 0.05
CDK5RAP3-216ENST00000579853 PDE8BO95263 885 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CTGFP29279 349 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 INPP5BP32019 993 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 MIGA2Q7L4E1 593 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 U2AF1L4Q8WU68 220 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 ZNF112Q9UJU3 913 aa15.36■□□□□ 0.05
CDK5RAP3-216ENST00000579853 UNC80Q8N2C7 3258 aa15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 CXCL11O14625 94 aa15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 FARP2O94887 1054 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
CDK5RAP3-216ENST00000579853 LAMA2P24043 3122 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 DLL1O00548 723 aa15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 BCRP11274 1271 aa15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 RABL6Q3YEC7 729 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 SLC4A10Q6U841 1118 aa15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 SUCLG2Q96I99 432 aa15.34■□□□□ 0.05
CDK5RAP3-216ENST00000579853 EVI5O60447 810 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 SGPL1O95470 568 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 BCAMP50895 628 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PRKCZQ05513 592 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PXYLP1Q8TE99 480 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 UTYO14607 1347 aa15.33■□□□□ 0.04
CDK5RAP3-216ENST00000579853 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 MOGSQ13724 837 aa15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 KAZALD1Q96I82 304 aa15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 BICC1Q9H694 974 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-216ENST00000579853 MGAMO43451 1857 aa15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 ADCY3O60266 1144 aa15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 NBPF7P0C2Y1 421 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 UNC93B1Q9H1C4 597 aa15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 SLC45A1Q9Y2W3 748 aa15.31■□□□□ 0.04
CDK5RAP3-216ENST00000579853 TFRCP02786 760 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 IRF5Q13568 498 aa15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
CDK5RAP3-216ENST00000579853 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 A0A0G2JLL6 359 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 CYP2C8P10632 490 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 SLC5A1P13866 664 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 FGFR2P21802 821 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 FLT3LGP49771 235 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 TCP10Q12799 353 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 CDC42EP5Q6NZY7 148 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PRRT2Q7Z6L0 340 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 LPIN2Q92539 896 aa15.29■□□□□ 0.04
CDK5RAP3-216ENST00000579853 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms