RNA–Protein interactions for RNA: ENST00000577887.1

SNORD53B-201, Transcript of small nucleolar RNA, C/D box 53B, humanhuman

BASIC

Gene SNORD53B, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53B-201ENST00000577887 KIF16BQ96L93 1317 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 POLR2AP24928 1970 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CEP290O15078 2479 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 A0A1W2PPC1 479 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SPDYE5A6NIY4 337 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 TRIM75PA6NK02 468 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 USP17L5A8MUK1 530 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 BTBD19C9JJ37 291 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 KBTBD13C9JR72 458 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 F6X3S4 739 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 APBB1O00213 710 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MPHOSPH10O00566 681 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CXCL11O14625 94 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 RAD21O60216 631 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ADCY3O60266 1144 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MSCO60682 206 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CTNND1O60716 968 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 HMMRO75330 724 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ENTPD3O75355 529 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 FARP2O94887 1054 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 PDE8BO95263 885 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 EGFRP00533 1210 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 IGKV5-2P06315 115 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CSF1RP07333 972 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ASNSP08243 561 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 UQCRFS1P1P0C7P4 283 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ZNF853P0CG23 659 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CCL5P13501 91 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 EN2P19622 333 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CNGA1P29973 690 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MAPK4P31152 587 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 IL15P40933 162 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 GYG1P46976 350 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ATP2B2Q01814 1243 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 EXOSC9Q06265 439 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MAP3K12Q12852 859 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 VGLL4Q14135 290 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 TTF1Q15361 905 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SPDYE2Q495Y8 402 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 HSP90AB4PQ58FF6 505 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 HABP4Q5JVS0 413 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 LDLRAD1Q5T700 205 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 NBPF12Q5TAG4 269 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 NAA16Q6N069 864 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SAMD1Q6SPF0 538 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 HHIPL2Q6UWX4 724 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CHRDL2Q6WN34 429 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 C15orf52Q6ZUT6 534 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MOB2Q70IA6 237 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MIGA2Q7L4E1 593 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ANKRD23Q86SG2 305 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 DPP9Q86TI2 863 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ERC1Q8IUD2 1116 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 TEX11Q8IYF3 940 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 TDRD7Q8NHU6 1098 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 FAM151AQ8WW52 585 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SOCS4Q8WXH5 440 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 FRAT1Q92837 279 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 VTI1AQ96AJ9 217 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 GPATCH3Q96I76 525 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ZNF594Q96JF6 807 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CLMNQ96JQ2 1002 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ZDHHC15Q96MV8 337 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 GMLQ99445 158 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MPHOSPH6Q99547 160 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 NUDT12Q9BQG2 462 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MXD3Q9BW11 206 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MRIQ9BWK5 157 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 TMEM39BQ9GZU3 492 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 NBPF3Q9H094 633 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 OSBPL5Q9H0X9 879 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SIL1Q9H173 461 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 MTIF3Q9H2K0 278 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 DHX36Q9H2U1 1008 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 BICC1Q9H694 974 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SH2D4AQ9H788 454 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ZNF287Q9HBT7 754 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SPINK5Q9NQ38 1064 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 GINM1Q9NU53 330 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SRRDQ9UH36 339 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 CPA4Q9UI42 421 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 HERC5Q9UII4 1024 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SCAF8Q9UPN6 1271 aaKnown RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SLC45A1Q9Y2W3 748 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 PTCH2Q9Y6C5 1203 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ZHX2Q9Y6X8 837 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 SIPA1L3O60292 1781 aaPredicted RBP1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ANKRD36CQ5JPF3 1778 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 KDM3BQ7LBC6 1761 aa1.92□□□□□ -2.1
SNORD53B-201ENST00000577887 ASTN2O75129 1339 aaPredicted RBP1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 FAM205AQ6ZU69 1335 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 FANCIQ9NVI1 1328 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 ZNF609O15014 1411 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 DLG5Q8TDM6 1919 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 CACNA1FO60840 1977 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 B4DLN1 442 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 C19orf81C9J6K1 198 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 USP17L10C9JJH3 530 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 EYA2O00167 538 aa1.91□□□□□ -2.1
SNORD53B-201ENST00000577887 IGF2BP3O00425 579 aaKnown RBP eCLIP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms