RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 NBPF3Q9H094 633 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 CRISPLD2Q9H0B8 497 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMG6-219ENST00000575663 MYH16Q9H6N6 1097 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 ARAP2Q8WZ64 1704 aa7.52□□□□□ -1.21
SMG6-219ENST00000575663 H7C1W4 665 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
SMG6-219ENST00000575663 CSF1RP07333 972 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 CYP2C8P10632 490 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 GNAI1P63096 354 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMG6-219ENST00000575663 TAF7LQ5H9L4 462 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 FAM109BQ6ICB4 259 aaPredicted RBP7.51□□□□□ -1.21
SMG6-219ENST00000575663 SMCR8Q8TEV9 937 aaPredicted RBP7.51□□□□□ -1.21
SMG6-219ENST00000575663 DIS3LQ8TF46 1054 aaKnown RBP7.51□□□□□ -1.21
SMG6-219ENST00000575663 SYMPKQ92797 1274 aaKnown RBP7.51□□□□□ -1.21
SMG6-219ENST00000575663 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 COA7Q96BR5 231 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 C11orf49Q9H6J7 331 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 MAST3O60307 1309 aa7.51□□□□□ -1.21
SMG6-219ENST00000575663 HMGCRP04035 888 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 HIBADHP31937 336 aaKnown RBP7.5□□□□□ -1.21
SMG6-219ENST00000575663 CACNB3P54284 484 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
SMG6-219ENST00000575663 FKBP1CQ5VVH2 108 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 FASTKD5Q7L8L6 764 aaKnown RBP7.5□□□□□ -1.21
SMG6-219ENST00000575663 TDRD7Q8NHU6 1098 aaKnown RBP7.5□□□□□ -1.21
SMG6-219ENST00000575663 TBC1D22AQ8WUA7 517 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 GUCD1Q96NT3 240 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 CNNM1Q9NRU3 951 aa7.5□□□□□ -1.21
SMG6-219ENST00000575663 MYH3P11055 1940 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 CXCL11O14625 94 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 PLIN1O60240 522 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 FRAT2O75474 233 aaPredicted RBP7.49□□□□□ -1.21
SMG6-219ENST00000575663 COL9A1P20849 921 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 INPP5BP32019 993 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 ZEB1P37275 1124 aaPredicted RBP7.49□□□□□ -1.21
SMG6-219ENST00000575663 GCKRQ14397 625 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 CCDC57Q2TAC2 916 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 NOL9Q5SY16 702 aaKnown RBP7.49□□□□□ -1.21
SMG6-219ENST00000575663 LDHAL6AQ6ZMR3 332 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 VPS37DQ86XT2 251 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 ZDHHC15Q96MV8 337 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 FAM161BQ96MY7 647 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 HMX1Q9NP08 348 aaPredicted RBP7.49□□□□□ -1.21
SMG6-219ENST00000575663 SLC45A1Q9Y2W3 748 aa7.49□□□□□ -1.21
SMG6-219ENST00000575663 A0A0G2JLL6 359 aaPredicted RBP7.48□□□□□ -1.21
SMG6-219ENST00000575663 POTEB2H3BUK9 544 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
SMG6-219ENST00000575663 MOGSQ13724 837 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 RALBP1Q15311 655 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 FAM110CQ1W6H9 321 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 GADL1Q6ZQY3 521 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 MIGA2Q7L4E1 593 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 PRRT2Q7Z6L0 340 aaPredicted RBP7.48□□□□□ -1.21
SMG6-219ENST00000575663 MAFAQ8NHW3 353 aaPredicted RBP7.48□□□□□ -1.21
SMG6-219ENST00000575663 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
SMG6-219ENST00000575663 GYG1P46976 350 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 CASP7P55210 303 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 CAVIN4Q5BKX8 364 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 LINS1Q8NG48 757 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 FAM151AQ8WW52 585 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 LBHD1Q9BQE6 289 aaPredicted RBP7.47□□□□□ -1.21
SMG6-219ENST00000575663 MRIQ9BWK5 157 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 ZNF112Q9UJU3 913 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 SUGT1Q9Y2Z0 365 aa7.47□□□□□ -1.21
SMG6-219ENST00000575663 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
SMG6-219ENST00000575663 PLA2G5P39877 138 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 MDM2Q00987 491 aaPredicted RBP7.46□□□□□ -1.22
SMG6-219ENST00000575663 FKBP5Q13451 457 aaPredicted RBP7.46□□□□□ -1.22
SMG6-219ENST00000575663 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.22
SMG6-219ENST00000575663 SCYL3Q8IZE3 742 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 C8orf58Q8NAV2 365 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 DNAAF4Q8WXU2 420 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 FAM84BQ96KN1 310 aaPredicted RBP7.46□□□□□ -1.22
SMG6-219ENST00000575663 PRKAG2Q9UGJ0 569 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 OGDHLQ9ULD0 1010 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 AGTPBP1Q9UPW5 1226 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 ZHX2Q9Y6X8 837 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 PFASO15067 1338 aa7.46□□□□□ -1.22
SMG6-219ENST00000575663 TNFRSF10AO00220 468 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 FOSL2P15408 326 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 TCP10Q12799 353 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 FLIIQ13045 1269 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 PABPC4Q13310 644 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMG6-219ENST00000575663 HHIPL2Q6UWX4 724 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 LMBR1LQ6UX01 489 aa7.45□□□□□ -1.22
SMG6-219ENST00000575663 FAM122AQ96E09 287 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms