RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 GJB4Q9NTQ9 266 aa19.27■□□□□ 0.68
LITAF-209ENST00000571688 DDX60Q8IY21 1712 aaKnown RBP19.27■□□□□ 0.68
LITAF-209ENST00000571688 AIMP1Q12904 312 aaKnown RBP19.27■□□□□ 0.68
LITAF-209ENST00000571688 GPHNQ9NQX3 736 aaPredicted RBP19.27■□□□□ 0.68
LITAF-209ENST00000571688 AKAP2Q9Y2D5 859 aa19.27■□□□□ 0.68
LITAF-209ENST00000571688 JRKLQ9Y4A0 524 aa19.27■□□□□ 0.68
LITAF-209ENST00000571688 CCDC175P0C221 793 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 CORO7P57737 925 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 TUBB4BP68371 445 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 GCKRQ14397 625 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
LITAF-209ENST00000571688 FOXP4Q8IVH2 680 aaPredicted RBP19.26■□□□□ 0.67
LITAF-209ENST00000571688 FAM71BQ8TC56 605 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 SLC26A8Q96RN1 970 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 PUF60Q9UHX1 559 aaKnown RBP19.26■□□□□ 0.67
LITAF-209ENST00000571688 ZNF18P17022 549 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 BMP6P22004 513 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 GUCY2CP25092 1073 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 CDC27P30260 824 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 OVOS2A0A0G2JMS6 1433 aa19.26■□□□□ 0.67
LITAF-209ENST00000571688 RNMTO43148 476 aaKnown RBP19.25■□□□□ 0.67
LITAF-209ENST00000571688 TUBB2AQ13885 445 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 PDIA6Q15084 440 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 LRRC31Q6UY01 552 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 TUBB2BQ9BVA1 445 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 HPS5Q9UPZ3 1129 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 C4AP0C0L4 1744 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 MTF1Q14872 753 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 PCDHA5Q9Y5H7 936 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 RGPD2P0DJD1 1756 aa19.25■□□□□ 0.67
LITAF-209ENST00000571688 SIPA1L3O60292 1781 aaPredicted RBP19.25■□□□□ 0.67
LITAF-209ENST00000571688 PTPAQ15257 358 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 JMYQ8N9B5 988 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 PPM1EQ8WY54 764 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 NWD2Q9ULI1 1742 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 MLECQ14165 292 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 CASP8Q14790 479 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 MAST3O60307 1309 aa19.24■□□□□ 0.67
LITAF-209ENST00000571688 HSP90AA4PQ58FG1 418 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 PANX2Q96RD6 677 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.23■□□□□ 0.67
LITAF-209ENST00000571688 PAG1Q9NWQ8 432 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 ADGRG1Q9Y653 693 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 KLF18A0A0U1RQI7 1052 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 GOLIM4O00461 696 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 VSNL1P62760 191 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 NEXNQ0ZGT2 675 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 LONRF3Q496Y0 759 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 ARHGEF25Q86VW2 580 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 IP6K1Q92551 441 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 PXDNQ92626 1479 aa19.23■□□□□ 0.67
LITAF-209ENST00000571688 SOWAHDA6NJG2 315 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 CCDC102BQ68D86 513 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 WWC2Q6AWC2 1192 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 TTLL5Q6EMB2 1281 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 CNNM3Q8NE01 707 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 GBP3Q9H0R5 595 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 LZTFL1Q9NQ48 299 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 KIF5CO60282 957 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 CPP00450 1065 aa19.22■□□□□ 0.67
LITAF-209ENST00000571688 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
LITAF-209ENST00000571688 ELOA2Q8IYF1 753 aaPredicted RBP19.22■□□□□ 0.67
LITAF-209ENST00000571688 SETD1BQ9UPS6 1966 aaKnown RBP19.22■□□□□ 0.67
LITAF-209ENST00000571688 MDM2Q00987 491 aaPredicted RBP19.21■□□□□ 0.67
LITAF-209ENST00000571688 FMR1Q06787 632 aaKnown RBP eCLIP19.21■□□□□ 0.67
LITAF-209ENST00000571688 HSP90B2PQ58FF3 399 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 RAD9BQ6WBX8 426 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 ABTB2Q8N961 1025 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 ENOX1Q8TC92 643 aaKnown RBP19.21■□□□□ 0.67
LITAF-209ENST00000571688 MAP3K14Q99558 947 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 MED4Q9NPJ6 270 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 AKR1B15C9JRZ8 316 aaPredicted RBP19.21■□□□□ 0.67
LITAF-209ENST00000571688 NR1I3Q14994 352 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
LITAF-209ENST00000571688 CLIC6Q96NY7 704 aa19.21■□□□□ 0.67
LITAF-209ENST00000571688 CPLX1O14810 134 aa19.21■□□□□ 0.66
LITAF-209ENST00000571688 ATP2B1P20020 1258 aa19.21■□□□□ 0.66
LITAF-209ENST00000571688 CCDC102AQ96A19 550 aa19.21■□□□□ 0.66
LITAF-209ENST00000571688 MYD88Q99836 296 aa19.21■□□□□ 0.66
LITAF-209ENST00000571688 NAA15Q9BXJ9 866 aaKnown RBP19.21■□□□□ 0.66
LITAF-209ENST00000571688 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.66
LITAF-209ENST00000571688 TNRQ92752 1358 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 A0A0U1RQJ8 604 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 TUBBP07437 444 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 ATRIPQ8WXE1 791 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 METTL22Q9BUU2 404 aaPredicted RBP19.2■□□□□ 0.66
LITAF-209ENST00000571688 MAN1B1Q9UKM7 699 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 PRC1O43663 620 aa19.2■□□□□ 0.66
LITAF-209ENST00000571688 PPFIA4O75335 1185 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms