RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.62■■□□□ 1.69
LITAF-205ENST00000570904 PNMA6EA0A0J9YXQ4 647 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 TESPA1A2RU30 521 aaPredicted RBP25.61■■□□□ 1.69
LITAF-205ENST00000570904 SOX10P56693 466 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 RASGRF1Q13972 1273 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 PKN2Q16513 984 aaKnown RBP25.61■■□□□ 1.69
LITAF-205ENST00000570904 ZKSCAN2Q63HK3 967 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 XAGE2Q96GT9 111 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 MS4A4AQ96JQ5 239 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 WRNIP1Q96S55 665 aa25.61■■□□□ 1.69
LITAF-205ENST00000570904 TCP10Q12799 353 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 NFIAQ12857 509 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 CRHR2Q13324 411 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 OTUD7BQ6GQQ9 843 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 OTUD5Q96G74 571 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 AKAP2Q9Y2D5 859 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 SNCAIPQ9Y6H5 919 aa25.6■■□□□ 1.69
LITAF-205ENST00000570904 MIGA2Q7L4E1 593 aa25.59■■□□□ 1.69
LITAF-205ENST00000570904 FAM151AQ8WW52 585 aa25.59■■□□□ 1.69
LITAF-205ENST00000570904 BRI3BPQ8WY22 251 aa25.59■■□□□ 1.69
LITAF-205ENST00000570904 ZKSCAN4Q969J2 545 aaPredicted RBP25.59■■□□□ 1.69
LITAF-205ENST00000570904 HOOK2Q96ED9 719 aa25.59■■□□□ 1.69
LITAF-205ENST00000570904 DCAF15Q66K64 600 aa25.58■■□□□ 1.69
LITAF-205ENST00000570904 NEUROD6Q96NK8 337 aa25.58■■□□□ 1.69
LITAF-205ENST00000570904 USP40Q9NVE5 1235 aa25.58■■□□□ 1.69
LITAF-205ENST00000570904 CCL15-CCL14A0A0B4J2E2 113 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 SPDYE5A6NIY4 337 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 ZBTB22O15209 634 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 GTF2A2P52657 109 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 MVPQ14764 893 aaKnown RBP25.57■■□□□ 1.68
LITAF-205ENST00000570904 CCL15Q16663 113 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 ZGPATQ8N5A5 531 aaKnown RBP25.57■■□□□ 1.68
LITAF-205ENST00000570904 FAM198AQ9UFP1 575 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 ABCF2Q9UG63 623 aa25.57■■□□□ 1.68
LITAF-205ENST00000570904 FBXO46Q6PJ61 603 aaPredicted RBP25.56■■□□□ 1.68
LITAF-205ENST00000570904 DZIP1Q86YF9 867 aaKnown RBP25.56■■□□□ 1.68
LITAF-205ENST00000570904 ZNF341Q9BYN7 854 aa25.56■■□□□ 1.68
LITAF-205ENST00000570904 PDS5AQ29RF7 1337 aaKnown RBP25.56■■□□□ 1.68
LITAF-205ENST00000570904 G3BP1Q13283 466 aaKnown RBP eCLIP25.55■■□□□ 1.68
LITAF-205ENST00000570904 TRIM17Q9Y577 477 aa25.55■■□□□ 1.68
LITAF-205ENST00000570904 GAKO14976 1311 aa25.55■■□□□ 1.68
LITAF-205ENST00000570904 INPP5BP32019 993 aa25.54■■□□□ 1.68
LITAF-205ENST00000570904 ERO1BQ86YB8 467 aa25.54■■□□□ 1.68
LITAF-205ENST00000570904 ZFPM1Q8IX07 1006 aa25.54■■□□□ 1.68
LITAF-205ENST00000570904 C1orf115Q9H7X2 142 aa25.54■■□□□ 1.68
LITAF-205ENST00000570904 HTTP42858 3142 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 PI16Q6UXB8 463 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 OTOP1Q7RTM1 612 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 FTSJ3Q8IY81 847 aaKnown RBP25.53■■□□□ 1.68
LITAF-205ENST00000570904 FAM43AQ8N2R8 423 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 CD99L2Q8TCZ2 262 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 MYH2Q9UKX2 1941 aa25.53■■□□□ 1.68
LITAF-205ENST00000570904 IRF6O14896 467 aa25.52■■□□□ 1.68
LITAF-205ENST00000570904 TAF1CQ15572 869 aaPredicted RBP25.52■■□□□ 1.68
LITAF-205ENST00000570904 GORABQ5T7V8 394 aa25.52■■□□□ 1.68
LITAF-205ENST00000570904 HMG20BQ9P0W2 317 aa25.52■■□□□ 1.68
LITAF-205ENST00000570904 RLBP1P12271 317 aa25.51■■□□□ 1.67
LITAF-205ENST00000570904 RGS3P49796 1198 aa25.51■■□□□ 1.67
LITAF-205ENST00000570904 PPIL2Q13356 520 aa25.51■■□□□ 1.67
LITAF-205ENST00000570904 SPTY2D1Q68D10 685 aaPredicted RBP25.51■■□□□ 1.67
LITAF-205ENST00000570904 ITPRIPQ8IWB1 547 aa25.51■■□□□ 1.67
LITAF-205ENST00000570904 ERO1AQ96HE7 468 aa25.51■■□□□ 1.67
LITAF-205ENST00000570904 SP3Q02447 781 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 POLA2Q14181 598 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 RFX7Q2KHR2 1363 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 AK9Q5TCS8 1911 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 ZBED9Q6R2W3 1325 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 ERICH6Q7L0X2 663 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 SLF2Q8IX21 1173 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 ZNF112Q9UJU3 913 aa25.5■■□□□ 1.67
LITAF-205ENST00000570904 TNRC18O15417 2968 aaPredicted RBP25.49■■□□□ 1.67
LITAF-205ENST00000570904 MROH7-TTC4A0A0A0MT08 1334 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 CETPP11597 493 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 ARID4AP29374 1257 aaPredicted RBP25.49■■□□□ 1.67
LITAF-205ENST00000570904 BTDP43251 543 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 CAP1Q01518 475 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 MECOMQ03112 1051 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 SNAPC2Q13487 334 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 SPATA5Q8NB90 893 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 IDI2Q9BXS1 227 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 ZFYVE28Q9HCC9 887 aa25.49■■□□□ 1.67
LITAF-205ENST00000570904 TBC1D9Q6ZT07 1266 aa25.48■■□□□ 1.67
LITAF-205ENST00000570904 SSH3Q8TE77 659 aa25.48■■□□□ 1.67
LITAF-205ENST00000570904 ZNF384Q8TF68 577 aa25.48■■□□□ 1.67
LITAF-205ENST00000570904 FAM163AQ96GL9 167 aaPredicted RBP25.48■■□□□ 1.67
LITAF-205ENST00000570904 DDX4Q9NQI0 724 aaKnown RBP25.48■■□□□ 1.67
LITAF-205ENST00000570904 ATRNL1Q5VV63 1379 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 BTBD19C9JJ37 291 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 ENTPD3O75355 529 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 WDHD1O75717 1129 aaPredicted RBP25.47■■□□□ 1.67
LITAF-205ENST00000570904 MCAMP43121 646 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 ATP8B2P98198 1209 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 PPATQ06203 517 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 OS9Q13438 667 aaPredicted RBP25.47■■□□□ 1.67
LITAF-205ENST00000570904 SH3BP5LQ7L8J4 393 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.47■■□□□ 1.67
LITAF-205ENST00000570904 EFCC1Q9HA90 598 aa25.47■■□□□ 1.67
LITAF-205ENST00000570904 PICALMQ13492 652 aa25.46■■□□□ 1.67
LITAF-205ENST00000570904 DOCK2Q92608 1830 aa25.45■■□□□ 1.66
LITAF-205ENST00000570904 TNNI3KQ59H18 835 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms