RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CCDC7Q96M83 1385 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 ARHGAP23Q9P227 1491 aa9.47□□□□□ -0.89
CNOT1-222ENST00000570139 KNDC1Q76NI1 1749 aa9.46□□□□□ -0.89
CNOT1-222ENST00000570139 ARHGEF28Q8N1W1 1705 aaKnown RBP9.46□□□□□ -0.89
CNOT1-222ENST00000570139 MSX1P28360 303 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
CNOT1-222ENST00000570139 PTPROQ16827 1216 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 ANKS3Q6ZW76 656 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 ZNF296Q8WUU4 475 aaPredicted RBP9.46□□□□□ -0.9
CNOT1-222ENST00000570139 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.9
CNOT1-222ENST00000570139 CEP44Q9C0F1 390 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
CNOT1-222ENST00000570139 BRD7Q9NPI1 651 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 KCNQ5Q9NR82 932 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 TMEM2Q9UHN6 1383 aa9.46□□□□□ -0.9
CNOT1-222ENST00000570139 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 ENPP3O14638 875 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 GRNP28799 593 aaKnown RBP9.45□□□□□ -0.9
CNOT1-222ENST00000570139 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 KCNB2Q92953 911 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 EAF1Q96JC9 268 aaPredicted RBP9.45□□□□□ -0.9
CNOT1-222ENST00000570139 BRINP2Q9C0B6 783 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 NRXN3Q9Y4C0 1643 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 QRICH2Q9H0J4 1663 aa9.45□□□□□ -0.9
CNOT1-222ENST00000570139 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 GFRA3O60609 400 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 IGBP1P78318 339 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 RAB33AQ14088 237 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 LRP10Q7Z4F1 713 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 RNF217Q8TC41 542 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 RHOVQ96L33 236 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 CRISPLD1Q9H336 500 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 LIN7BQ9HAP6 207 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 WASHC2AQ641Q2 1341 aa9.44□□□□□ -0.9
CNOT1-222ENST00000570139 SETD1BQ9UPS6 1966 aaKnown RBP9.44□□□□□ -0.9
CNOT1-222ENST00000570139 PTPRMP28827 1452 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 ST20-MTHFSA0A0A6YYL1 179 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 TMF1P82094 1093 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 PEAR1Q5VY43 1037 aaPredicted RBP9.43□□□□□ -0.9
CNOT1-222ENST00000570139 NLRP8Q86W28 1048 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 THEMISQ8N1K5 641 aaPredicted RBP9.43□□□□□ -0.9
CNOT1-222ENST00000570139 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 PHC3Q8NDX5 983 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
CNOT1-222ENST00000570139 TMX1Q9H3N1 280 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 KANSL3Q9P2N6 904 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
CNOT1-222ENST00000570139 ASXL1Q8IXJ9 1541 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 F6X3S4 739 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 KLF4O43474 513 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 ETFBP38117 255 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 KCNQ4P56696 695 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 MAP3K10Q02779 954 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 OR13H1Q8NG92 308 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 PRKAG3Q9UGI9 489 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
CNOT1-222ENST00000570139 BMP2P12643 396 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 SMPD1P17405 629 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 LIG3P49916 1009 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 ANAPC15P60006 121 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 SNAP47Q5SQN1 464 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 FBXL19Q6PCT2 694 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 KCNH4Q9UQ05 1017 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 CPS1P31327 1500 aa9.41□□□□□ -0.9
CNOT1-222ENST00000570139 TECPR2O15040 1411 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 YTHDC2Q9H6S0 1430 aaKnown RBP9.4□□□□□ -0.9
CNOT1-222ENST00000570139 CENPJQ9HC77 1338 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-222ENST00000570139 GREM1O60565 184 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-222ENST00000570139 LMNB2Q03252 620 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 MAP3K11Q16584 847 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 PCNX4Q63HM2 1172 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 ZNF775Q96BV0 537 aaPredicted RBP9.4□□□□□ -0.9
CNOT1-222ENST00000570139 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 TESK2Q96S53 571 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 TOR4AQ9NXH8 423 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 SNTG2Q9NY99 539 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 SALL4Q9UJQ4 1053 aa9.4□□□□□ -0.9
CNOT1-222ENST00000570139 KTN1Q86UP2 1357 aaKnown RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 FBXO24O75426 580 aa9.39□□□□□ -0.91
CNOT1-222ENST00000570139 SASH3O75995 380 aa9.39□□□□□ -0.91
CNOT1-222ENST00000570139 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms