RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 GRIK5Q16478 980 aa23.07■■□□□ 1.28
LINC01238-205ENST00000567549 SPTY2D1Q68D10 685 aaPredicted RBP23.07■■□□□ 1.28
LINC01238-205ENST00000567549 AK9Q5TCS8 1911 aa23.07■■□□□ 1.28
LINC01238-205ENST00000567549 CACNB3P54284 484 aa23.06■■□□□ 1.28
LINC01238-205ENST00000567549 OTOP1Q7RTM1 612 aa23.06■■□□□ 1.28
LINC01238-205ENST00000567549 MS4A4AQ96JQ5 239 aa23.06■■□□□ 1.28
LINC01238-205ENST00000567549 R3HDMLQ9H3Y0 253 aa23.06■■□□□ 1.28
LINC01238-205ENST00000567549 EFCC1Q9HA90 598 aa23.06■■□□□ 1.28
LINC01238-205ENST00000567549 MVPQ14764 893 aaKnown RBP23.05■■□□□ 1.28
LINC01238-205ENST00000567549 KIF22Q14807 665 aa23.05■■□□□ 1.28
LINC01238-205ENST00000567549 PDS5AQ29RF7 1337 aaKnown RBP23.05■■□□□ 1.28
LINC01238-205ENST00000567549 PDE4DIPQ5VU43 2346 aa23.04■■□□□ 1.28
LINC01238-205ENST00000567549 SRGAP3O43295 1099 aa23.04■■□□□ 1.28
LINC01238-205ENST00000567549 PPATQ06203 517 aa23.04■■□□□ 1.28
LINC01238-205ENST00000567549 PPIL2Q13356 520 aa23.04■■□□□ 1.28
LINC01238-205ENST00000567549 DAGLAQ9Y4D2 1042 aa23.04■■□□□ 1.28
LINC01238-205ENST00000567549 MTX1Q13505 466 aa23.03■■□□□ 1.28
LINC01238-205ENST00000567549 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
LINC01238-205ENST00000567549 DZIP1Q86YF9 867 aaKnown RBP23.03■■□□□ 1.28
LINC01238-205ENST00000567549 BRI3BPQ8WY22 251 aa23.03■■□□□ 1.28
LINC01238-205ENST00000567549 MEIS3Q99687 375 aa23.03■■□□□ 1.28
LINC01238-205ENST00000567549 PTPN18Q99952 460 aa23.03■■□□□ 1.28
LINC01238-205ENST00000567549 PRDX5P30044 214 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 CCDC102BQ68D86 513 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 CDAN1Q8IWY9 1227 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 CD99L2Q8TCZ2 262 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 PTPN22Q9Y2R2 807 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 SNCAIPQ9Y6H5 919 aa23.02■■□□□ 1.28
LINC01238-205ENST00000567549 GNRH1P01148 92 aa23.01■■□□□ 1.27
LINC01238-205ENST00000567549 CDC42EP5Q6NZY7 148 aa23.01■■□□□ 1.27
LINC01238-205ENST00000567549 NBPF11Q86T75 865 aa23.01■■□□□ 1.27
LINC01238-205ENST00000567549 USP40Q9NVE5 1235 aa23.01■■□□□ 1.27
LINC01238-205ENST00000567549 GNAI2P04899 355 aa23■■□□□ 1.27
LINC01238-205ENST00000567549 PHKA1P46020 1223 aa23■■□□□ 1.27
LINC01238-205ENST00000567549 DIXDC1Q155Q3 683 aa23■■□□□ 1.27
LINC01238-205ENST00000567549 GORABQ5T7V8 394 aa23■■□□□ 1.27
LINC01238-205ENST00000567549 ATF7IPQ6VMQ6 1270 aa23■■□□□ 1.27
LINC01238-205ENST00000567549 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
LINC01238-205ENST00000567549 ENTPD3O75355 529 aa22.99■■□□□ 1.27
LINC01238-205ENST00000567549 TCP10Q12799 353 aa22.99■■□□□ 1.27
LINC01238-205ENST00000567549 ZKSCAN4Q969J2 545 aaPredicted RBP22.99■■□□□ 1.27
LINC01238-205ENST00000567549 ABCF2Q9UG63 623 aa22.99■■□□□ 1.27
LINC01238-205ENST00000567549 MYH2Q9UKX2 1941 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 A0A1B0GUL7 405 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 IRF6O14896 467 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 TLR2O60603 784 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
LINC01238-205ENST00000567549 GSTO1P78417 241 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 PRPF38BQ5VTL8 546 aaKnown RBP22.98■■□□□ 1.27
LINC01238-205ENST00000567549 CNKSR2Q8WXI2 1034 aa22.98■■□□□ 1.27
LINC01238-205ENST00000567549 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
LINC01238-205ENST00000567549 PRMT2P55345 433 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 G3BP1Q13283 466 aaKnown RBP eCLIP22.97■■□□□ 1.27
LINC01238-205ENST00000567549 NOL9Q5SY16 702 aaKnown RBP22.97■■□□□ 1.27
LINC01238-205ENST00000567549 ERICH6Q7L0X2 663 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 MIGA2Q7L4E1 593 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 TMEM106CQ9BVX2 250 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 IDI2Q9BXS1 227 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 ZNF112Q9UJU3 913 aa22.97■■□□□ 1.27
LINC01238-205ENST00000567549 LDHCP07864 332 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 RASGRF1Q13972 1273 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 ZSCAN29Q8IWY8 852 aaPredicted RBP22.96■■□□□ 1.27
LINC01238-205ENST00000567549 FAM43AQ8N2R8 423 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 FAM163AQ96GL9 167 aaPredicted RBP22.96■■□□□ 1.27
LINC01238-205ENST00000567549 XAGE2Q96GT9 111 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 NEUROD6Q96NK8 337 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 GAKO14976 1311 aa22.96■■□□□ 1.27
LINC01238-205ENST00000567549 TRIM27P14373 513 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 TFCP2Q12800 502 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 ZKSCAN2Q63HK3 967 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 ANKRD23Q86SG2 305 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 ARMC5Q96C12 935 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 PICK1Q9NRD5 415 aa22.95■■□□□ 1.26
LINC01238-205ENST00000567549 DOCK2Q92608 1830 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 BTBD19C9JJ37 291 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 HOXD10P28358 340 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 TIMM10P62072 90 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 SLC9C1Q4G0N8 1177 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 KCNH4Q9UQ05 1017 aa22.94■■□□□ 1.26
LINC01238-205ENST00000567549 CXCL11O14625 94 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 UQCRFS1P1P0C7P4 283 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 ADORA1P30542 326 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 INPP5BP32019 993 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 NFIAQ12857 509 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 NOL10Q9BSC4 688 aaKnown RBP22.93■■□□□ 1.26
LINC01238-205ENST00000567549 FAM198AQ9UFP1 575 aa22.93■■□□□ 1.26
LINC01238-205ENST00000567549 RBBP6Q7Z6E9 1792 aaKnown RBP22.93■■□□□ 1.26
LINC01238-205ENST00000567549 MROH7-TTC4A0A0A0MT08 1334 aa22.92■■□□□ 1.26
LINC01238-205ENST00000567549 IGSF3O75054 1194 aa22.92■■□□□ 1.26
LINC01238-205ENST00000567549 RGS3P49796 1198 aa22.92■■□□□ 1.26
LINC01238-205ENST00000567549 FASTKD5Q7L8L6 764 aaKnown RBP22.92■■□□□ 1.26
LINC01238-205ENST00000567549 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.92■■□□□ 1.26
LINC01238-205ENST00000567549 PARK7Q99497 189 aaKnown RBP22.92■■□□□ 1.26
LINC01238-205ENST00000567549 SLC34A2O95436 690 aa22.91■■□□□ 1.26
LINC01238-205ENST00000567549 BTDP43251 543 aa22.91■■□□□ 1.26
LINC01238-205ENST00000567549 LACTBP83111 547 aaPredicted RBP22.91■■□□□ 1.26
LINC01238-205ENST00000567549 FTSJ3Q8IY81 847 aaKnown RBP22.91■■□□□ 1.26
LINC01238-205ENST00000567549 GCC1Q96CN9 775 aa22.91■■□□□ 1.26
LINC01238-205ENST00000567549 NPM3O75607 178 aaKnown RBP22.9■■□□□ 1.26
LINC01238-205ENST00000567549 OS9Q13438 667 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms