RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SUGT1Q9Y2Z0 365 aa13.94□□□□□ -0.18
KARS-207ENST00000566560 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 USP17L8P0C7I0 530 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 YY1P25490 414 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 RGS3P49796 1198 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 OGFOD1Q8N543 542 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 DPF2Q92785 391 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 RAI14Q9P0K7 980 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 LRP2BPQ9P2M1 347 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
KARS-207ENST00000566560 IQCA1LA6NCM1 817 aa13.92□□□□□ -0.18
KARS-207ENST00000566560 IDH1O75874 414 aaKnown RBP13.92□□□□□ -0.18
KARS-207ENST00000566560 MAP4K4O95819 1239 aaPredicted RBP13.92□□□□□ -0.18
KARS-207ENST00000566560 IER5LQ5T953 404 aa13.92□□□□□ -0.18
KARS-207ENST00000566560 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
KARS-207ENST00000566560 HACL1Q9UJ83 578 aa13.92□□□□□ -0.18
KARS-207ENST00000566560 H7C1D1 291 aa13.91□□□□□ -0.18
KARS-207ENST00000566560 EPS15P42566 896 aa13.91□□□□□ -0.18
KARS-207ENST00000566560 ZNF280AP59817 542 aaPredicted RBP13.91□□□□□ -0.18
KARS-207ENST00000566560 MAP3K12Q12852 859 aa13.91□□□□□ -0.18
KARS-207ENST00000566560 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
KARS-207ENST00000566560 EPHX2P34913 555 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 MECOMQ03112 1051 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 DIXDC1Q155Q3 683 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 CNTROBQ8N137 903 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 KBTBD3Q8NAB2 608 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 TEKT1Q969V4 418 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 FSD1Q9BTV5 496 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.18
KARS-207ENST00000566560 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 NMRK2Q9NPI5 230 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
KARS-207ENST00000566560 SERPINA10Q9UK55 444 aa13.9□□□□□ -0.18
KARS-207ENST00000566560 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
KARS-207ENST00000566560 CRKP46108 304 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 MMP14P50281 582 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 RBM5P52756 815 aaKnown RBP eCLIP13.89□□□□□ -0.19
KARS-207ENST00000566560 GSTO1P78417 241 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 TBC1D10BQ4KMP7 808 aaPredicted RBP13.89□□□□□ -0.19
KARS-207ENST00000566560 NAA16Q6N069 864 aaPredicted RBP13.89□□□□□ -0.19
KARS-207ENST00000566560 SLF2Q8IX21 1173 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
KARS-207ENST00000566560 EVI5LQ96CN4 794 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 GPBP1L1Q9HC44 474 aaPredicted RBP13.89□□□□□ -0.19
KARS-207ENST00000566560 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
KARS-207ENST00000566560 POTECB2RU33 542 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 IGSF3O75054 1194 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 PDE6AP16499 860 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 HDLBPQ00341 1268 aaKnown RBP13.88□□□□□ -0.19
KARS-207ENST00000566560 RBM26Q5T8P6 1007 aaKnown RBP13.88□□□□□ -0.19
KARS-207ENST00000566560 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 MAGEB6Q8N7X4 407 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 ZNF384Q8TF68 577 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 TAF1DQ9H5J8 278 aaPredicted RBP13.88□□□□□ -0.19
KARS-207ENST00000566560 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 DAGLAQ9Y4D2 1042 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 GAKO14976 1311 aa13.88□□□□□ -0.19
KARS-207ENST00000566560 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 EGFRP00533 1210 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
KARS-207ENST00000566560 CYP7A1P22680 504 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 DLGAP5Q15398 846 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
KARS-207ENST00000566560 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
KARS-207ENST00000566560 SLC9C2Q5TAH2 1124 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 ZSCAN25Q6NSZ9 544 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 ZDHHC15Q96MV8 337 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
KARS-207ENST00000566560 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 LDHCP07864 332 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 ADD2P35612 726 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 BTDP43251 543 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
KARS-207ENST00000566560 HHIPL2Q6UWX4 724 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
KARS-207ENST00000566560 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
KARS-207ENST00000566560 MTMR14Q8NCE2 650 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
KARS-207ENST00000566560 ZNF532Q9HCE3 1301 aa13.86□□□□□ -0.19
KARS-207ENST00000566560 NAV1Q8NEY1 1877 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 WNT10BO00744 389 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 MYO1BO43795 1136 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
KARS-207ENST00000566560 SDSP20132 328 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 BMP2KLQ5H9B9 411 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
KARS-207ENST00000566560 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
KARS-207ENST00000566560 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
KARS-207ENST00000566560 TCRBV5S4A2TA0A5A2 114 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms