RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SREBF2Q12772 1141 aa18.1■□□□□ 0.49
FANCA-220ENST00000566409 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
FANCA-220ENST00000566409 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
FANCA-220ENST00000566409 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
FANCA-220ENST00000566409 TMOD2Q9NZR1 351 aa18.1■□□□□ 0.49
FANCA-220ENST00000566409 GAKO14976 1311 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 MANSC4A6NHS7 340 aaPredicted RBP18.09■□□□□ 0.49
FANCA-220ENST00000566409 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
FANCA-220ENST00000566409 SURF6O75683 361 aaKnown RBP18.09■□□□□ 0.49
FANCA-220ENST00000566409 ARID4AP29374 1257 aaPredicted RBP18.09■□□□□ 0.49
FANCA-220ENST00000566409 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 DGKZQ13574 1117 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 VGLL4Q14135 290 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 ZFPM1Q8IX07 1006 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 USP40Q9NVE5 1235 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 FAM198AQ9UFP1 575 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 ABCF2Q9UG63 623 aa18.09■□□□□ 0.49
FANCA-220ENST00000566409 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
FANCA-220ENST00000566409 RPAP1Q9BWH6 1393 aaPredicted RBP18.08■□□□□ 0.49
FANCA-220ENST00000566409 MCAMP43121 646 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 TCP10Q12799 353 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 CEP85Q6P2H3 762 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 TBC1D9Q6ZT07 1266 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 IFNL1Q8IU54 200 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 ZGPATQ8N5A5 531 aaKnown RBP18.08■□□□□ 0.48
FANCA-220ENST00000566409 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 FAM151AQ8WW52 585 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 OPTNQ96CV9 577 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 PTPN18Q99952 460 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 CFHR5Q9BXR6 569 aa18.08■□□□□ 0.48
FANCA-220ENST00000566409 MYO5AQ9Y4I1 1855 aaKnown RBP18.07■□□□□ 0.48
FANCA-220ENST00000566409 INHBEP58166 350 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 TNNI3KQ59H18 835 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 MIGA2Q7L4E1 593 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 ZNF296Q8WUU4 475 aaPredicted RBP18.07■□□□□ 0.48
FANCA-220ENST00000566409 FAM163AQ96GL9 167 aaPredicted RBP18.07■□□□□ 0.48
FANCA-220ENST00000566409 MS4A4AQ96JQ5 239 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 GPR108Q9NPR9 543 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 FPGT-TNNI3KV9GXZ4 949 aa18.07■□□□□ 0.48
FANCA-220ENST00000566409 TESPA1A2RU30 521 aaPredicted RBP18.06■□□□□ 0.48
FANCA-220ENST00000566409 GPR25O00155 361 aa18.06■□□□□ 0.48
FANCA-220ENST00000566409 MECOMQ03112 1051 aa18.06■□□□□ 0.48
FANCA-220ENST00000566409 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
FANCA-220ENST00000566409 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
FANCA-220ENST00000566409 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
FANCA-220ENST00000566409 SNCAIPQ9Y6H5 919 aa18.06■□□□□ 0.48
FANCA-220ENST00000566409 RFX7Q2KHR2 1363 aa18.05■□□□□ 0.48
FANCA-220ENST00000566409 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
FANCA-220ENST00000566409 NOM1Q5C9Z4 860 aaKnown RBP18.05■□□□□ 0.48
FANCA-220ENST00000566409 SPTY2D1Q68D10 685 aaPredicted RBP18.05■□□□□ 0.48
FANCA-220ENST00000566409 DZIP1Q86YF9 867 aaKnown RBP18.05■□□□□ 0.48
FANCA-220ENST00000566409 WRNIP1Q96S55 665 aa18.05■□□□□ 0.48
FANCA-220ENST00000566409 WDHD1O75717 1129 aaPredicted RBP18.04■□□□□ 0.48
FANCA-220ENST00000566409 RGS3P49796 1198 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 SH3BP5LQ7L8J4 393 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
FANCA-220ENST00000566409 EAF2Q96CJ1 260 aaPredicted RBP18.04■□□□□ 0.48
FANCA-220ENST00000566409 IDI2Q9BXS1 227 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 CSADQ9Y600 493 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 ATRNL1Q5VV63 1379 aa18.04■□□□□ 0.48
FANCA-220ENST00000566409 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 GPR75-ASB3A0A0A6YYF3 556 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 CCDC85CA6NKD9 419 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 UQCRFS1P1P0C7P4 283 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 INPP5BP32019 993 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 BTDP43251 543 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 RHBDL3P58872 404 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 CTU1Q7Z7A3 348 aaKnown RBP18.03■□□□□ 0.48
FANCA-220ENST00000566409 BRI3BPQ8WY22 251 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 OTUD5Q96G74 571 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
FANCA-220ENST00000566409 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
FANCA-220ENST00000566409 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
FANCA-220ENST00000566409 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
FANCA-220ENST00000566409 SPDYE5A6NIY4 337 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 SLURP2P0DP57 97 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 DCAF15Q66K64 600 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 HOOK2Q96ED9 719 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 ZNF341Q9BYN7 854 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 ZBTB40Q9NUA8 1239 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.48
FANCA-220ENST00000566409 HTTP42858 3142 aa18.02■□□□□ 0.47
FANCA-220ENST00000566409 ENTPD3O75355 529 aa18.01■□□□□ 0.47
FANCA-220ENST00000566409 CYP2E1P05181 493 aaPredicted RBP18.01■□□□□ 0.47
FANCA-220ENST00000566409 MS4A1P11836 297 aa18.01■□□□□ 0.47
FANCA-220ENST00000566409 CRHR2Q13324 411 aa18.01■□□□□ 0.47
FANCA-220ENST00000566409 ERO1BQ86YB8 467 aa18.01■□□□□ 0.47
FANCA-220ENST00000566409 SLF2Q8IX21 1173 aa18.01■□□□□ 0.47
FANCA-220ENST00000566409 ZNF512BQ96KM6 892 aaPredicted RBP18.01■□□□□ 0.47
FANCA-220ENST00000566409 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
FANCA-220ENST00000566409 CCL15-CCL14A0A0B4J2E2 113 aa18■□□□□ 0.47
FANCA-220ENST00000566409 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
FANCA-220ENST00000566409 IRF6O14896 467 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms