RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-214ENST00000566230 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
COMMD4-214ENST00000566230 GNRH1P01148 92 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 INPP5BP32019 993 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 MTFR1Q15390 333 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 SZT2Q5T011 3432 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 HHIPL2Q6UWX4 724 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 MIGA2Q7L4E1 593 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 TMOD2Q9NZR1 351 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
COMMD4-214ENST00000566230 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-214ENST00000566230 ADGRA2Q96PE1 1338 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 FGFR2P21802 821 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 PRMT2P55345 433 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 PPATQ06203 517 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-214ENST00000566230 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 TRIM47Q96LD4 638 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 ZNF341Q9BYN7 854 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 SUGT1Q9Y2Z0 365 aa16.82■□□□□ 0.28
COMMD4-214ENST00000566230 RANBP2P49792 3224 aaKnown RBP16.82■□□□□ 0.28
COMMD4-214ENST00000566230 PSMC4P43686 418 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 MOGSQ13724 837 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 DCAF15Q66K64 600 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 ANKRD23Q86SG2 305 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 KCNH4Q9UQ05 1017 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 MGAMO43451 1857 aa16.81■□□□□ 0.28
COMMD4-214ENST00000566230 MAST3O60307 1309 aa16.8■□□□□ 0.28
COMMD4-214ENST00000566230 PDHXO00330 501 aa16.8■□□□□ 0.28
COMMD4-214ENST00000566230 FAM151AQ8WW52 585 aa16.8■□□□□ 0.28
COMMD4-214ENST00000566230 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
COMMD4-214ENST00000566230 OSBPP22059 807 aa16.79■□□□□ 0.28
COMMD4-214ENST00000566230 DAGLAQ9Y4D2 1042 aa16.79■□□□□ 0.28
COMMD4-214ENST00000566230 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
COMMD4-214ENST00000566230 GRK4P32298 578 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 TCP10Q12799 353 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 NFIAQ12857 509 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
COMMD4-214ENST00000566230 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 UBE2Q1Q7Z7E8 422 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 MRPL50Q8N5N7 158 aaKnown RBP16.78■□□□□ 0.28
COMMD4-214ENST00000566230 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
COMMD4-214ENST00000566230 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-214ENST00000566230 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-214ENST00000566230 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.28
COMMD4-214ENST00000566230 GPAT2Q6NUI2 795 aa16.77■□□□□ 0.28
COMMD4-214ENST00000566230 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
COMMD4-214ENST00000566230 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.28
COMMD4-214ENST00000566230 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
COMMD4-214ENST00000566230 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 DOCK3Q8IZD9 2030 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 GJB1P08034 283 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 CCL5P13501 91 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 HOXD10P28358 340 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 NOL9Q5SY16 702 aaKnown RBP16.76■□□□□ 0.27
COMMD4-214ENST00000566230 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 RAET1EQ8TD07 263 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 DPF3Q92784 378 aa16.76■□□□□ 0.27
COMMD4-214ENST00000566230 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
COMMD4-214ENST00000566230 PTPRFP10586 1907 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 MYH2Q9UKX2 1941 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 EYA2O00167 538 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 BCRP11274 1271 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 GJA8P48165 433 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 ATG9AQ7Z3C6 839 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 LPIN2Q92539 896 aa16.75■□□□□ 0.27
COMMD4-214ENST00000566230 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 CYP2C8P10632 490 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 SLC5A1P13866 664 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 PRDX5P30044 214 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 PRKCZQ05513 592 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 GABRQQ9UN88 632 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 DOCK2Q92608 1830 aa16.74■□□□□ 0.27
COMMD4-214ENST00000566230 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 CXCL11O14625 94 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 RNF208Q9H0X6 261 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 ATRNL1Q5VV63 1379 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
COMMD4-214ENST00000566230 PTPRCP08575 1304 aa16.72■□□□□ 0.27
COMMD4-214ENST00000566230 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
COMMD4-214ENST00000566230 UNC93B1Q9H1C4 597 aa16.72■□□□□ 0.27
COMMD4-214ENST00000566230 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
COMMD4-214ENST00000566230 E9PSI1 815 aa16.71■□□□□ 0.27
COMMD4-214ENST00000566230 LDHBP07195 334 aaKnown RBP16.71■□□□□ 0.27
COMMD4-214ENST00000566230 FCGRTP55899 365 aa16.71■□□□□ 0.27
COMMD4-214ENST00000566230 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
COMMD4-214ENST00000566230 U2AF1L4Q8WU68 220 aaKnown RBP16.71■□□□□ 0.27
COMMD4-214ENST00000566230 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
COMMD4-214ENST00000566230 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
COMMD4-214ENST00000566230 A0A0G2JLL6 359 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-214ENST00000566230 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
COMMD4-214ENST00000566230 RGS3P49796 1198 aa16.7■□□□□ 0.26
COMMD4-214ENST00000566230 UBXN2AP68543 259 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 295.9 ms