RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 FAM227BQ96M60 508 aa17.81■□□□□ 0.44
SPG7-213ENST00000566221 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
SPG7-213ENST00000566221 LAMB1P07942 1786 aa17.81■□□□□ 0.44
SPG7-213ENST00000566221 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
SPG7-213ENST00000566221 GPR75-ASB3A0A0A6YYF3 556 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 IQCA1LA6NCM1 817 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 BAG3O95817 575 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 BTDP43251 543 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 DLGAP5Q15398 846 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
SPG7-213ENST00000566221 JMYQ8N9B5 988 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 OSBP2Q969R2 916 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 AIDAQ96BJ3 306 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 NMRK2Q9NPI5 230 aa17.8■□□□□ 0.44
SPG7-213ENST00000566221 POLR2AP24928 1970 aaKnown RBP17.8■□□□□ 0.44
SPG7-213ENST00000566221 LAMA4Q16363 1823 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 PLCG2P16885 1265 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 MFAP1P55081 439 aaKnown RBP17.79■□□□□ 0.44
SPG7-213ENST00000566221 KIF4BQ2VIQ3 1234 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 MIGA1Q8NAN2 632 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
SPG7-213ENST00000566221 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPG7-213ENST00000566221 HACL1Q9UJ83 578 aa17.79■□□□□ 0.44
SPG7-213ENST00000566221 M0R2C6 588 aa17.78■□□□□ 0.44
SPG7-213ENST00000566221 MBD4O95243 580 aa17.78■□□□□ 0.44
SPG7-213ENST00000566221 EPS15P42566 896 aa17.78■□□□□ 0.44
SPG7-213ENST00000566221 PPP4CP60510 307 aa17.78■□□□□ 0.44
SPG7-213ENST00000566221 ZBED3Q96IU2 234 aaPredicted RBP17.78■□□□□ 0.44
SPG7-213ENST00000566221 RIOK1Q9BRS2 568 aaKnown RBP17.78■□□□□ 0.44
SPG7-213ENST00000566221 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
SPG7-213ENST00000566221 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.44
SPG7-213ENST00000566221 GPAA1O43292 621 aa17.77■□□□□ 0.44
SPG7-213ENST00000566221 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
SPG7-213ENST00000566221 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
SPG7-213ENST00000566221 RBM46Q8TBY0 533 aaKnown RBP17.77■□□□□ 0.44
SPG7-213ENST00000566221 SEC62Q99442 399 aaKnown RBP17.77■□□□□ 0.44
SPG7-213ENST00000566221 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
SPG7-213ENST00000566221 SGSM2O43147 1006 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 MYO1BO43795 1136 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
SPG7-213ENST00000566221 SAMD7Q7Z3H4 446 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 CRNKL1Q9BZJ0 848 aaKnown RBP17.76■□□□□ 0.43
SPG7-213ENST00000566221 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
SPG7-213ENST00000566221 MYH8P13535 1937 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 WNT10BO00744 389 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 EGFRP00533 1210 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 GNAT2P19087 354 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 EPHX2P34913 555 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 RHBDL3P58872 404 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 RBM26Q5T8P6 1007 aaKnown RBP17.75■□□□□ 0.43
SPG7-213ENST00000566221 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 ZNF589Q86UQ0 364 aaPredicted RBP17.75■□□□□ 0.43
SPG7-213ENST00000566221 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 SH3RF3Q8TEJ3 882 aaPredicted RBP17.75■□□□□ 0.43
SPG7-213ENST00000566221 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
SPG7-213ENST00000566221 TMOD2Q9NZR1 351 aa17.75■□□□□ 0.43
SPG7-213ENST00000566221 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
SPG7-213ENST00000566221 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 TEX11Q8IYF3 940 aa17.74■□□□□ 0.43
SPG7-213ENST00000566221 STRBPQ96SI9 672 aaKnown RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 IL25Q9H293 177 aa17.74■□□□□ 0.43
SPG7-213ENST00000566221 TAF1DQ9H5J8 278 aaPredicted RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 TDRD3Q9H7E2 651 aaKnown RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 USP40Q9NVE5 1235 aa17.74■□□□□ 0.43
SPG7-213ENST00000566221 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
SPG7-213ENST00000566221 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SPG7-213ENST00000566221 C8orf34Q49A92 452 aa17.73■□□□□ 0.43
SPG7-213ENST00000566221 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
SPG7-213ENST00000566221 POTECB2RU33 542 aa17.72■□□□□ 0.43
SPG7-213ENST00000566221 VEGFAP15692 232 aaPredicted RBP17.72■□□□□ 0.43
SPG7-213ENST00000566221 FSTL1Q12841 308 aa17.72■□□□□ 0.43
SPG7-213ENST00000566221 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
SPG7-213ENST00000566221 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
SPG7-213ENST00000566221 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
SPG7-213ENST00000566221 SIPA1L1O43166 1804 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 CLRN2A0PK11 232 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 WDHD1O75717 1129 aaPredicted RBP17.71■□□□□ 0.43
SPG7-213ENST00000566221 REC8O95072 547 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 USP5P45974 858 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 FKBP1CQ5VVH2 108 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 IDI2Q9BXS1 227 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
SPG7-213ENST00000566221 PITPNM2Q9BZ72 1349 aa17.71■□□□□ 0.42
SPG7-213ENST00000566221 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
SPG7-213ENST00000566221 HIRAP54198 1017 aaPredicted RBP17.7■□□□□ 0.42
SPG7-213ENST00000566221 TNFAIP1Q13829 316 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 APOBEC3FQ8IUX4 373 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms