RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 GCGRP47871 477 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 ZNF131P52739 623 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 KANK3Q6NY19 840 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 HINFPQ9BQA5 517 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 PTPRHQ9HD43 1115 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 FAM50BQ9Y247 325 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 SYNGAP1Q96PV0 1343 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 SMTNL1A8MU46 457 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 RNASEH2AO75792 299 aaKnown RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 TPM2P07951 284 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 U2AF1L5P0DN76 240 aaPredicted RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 U2AF1Q01081 240 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHD9-216ENST00000565803 ATP2B2Q01814 1243 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 SLC15A2Q16348 729 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 FAM98CQ17RN3 349 aaKnown RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 CRTC2Q53ET0 693 aaPredicted RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 SPECC1Q5M775 1068 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 VARS2Q5ST30 1063 aaKnown RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 USP48Q86UV5 1035 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 HELQQ8TDG4 1101 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 CABLES1Q8TDN4 633 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 ABHD8Q96I13 439 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 SLC26A8Q96RN1 970 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 EIF2AK1Q9BQI3 630 aaKnown RBP3.67□□□□□ -1.82
CHD9-216ENST00000565803 IFT122Q9HBG6 1241 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 NLRP2Q9NX02 1062 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 C4AP0C0L4 1744 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 C4BP0C0L5 1744 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 CNTNAP1P78357 1384 aa3.67□□□□□ -1.82
CHD9-216ENST00000565803 PIK3CDO00329 1044 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 DIXDC1Q155Q3 683 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 SMAP1Q8IYB5 467 aaPredicted RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 FRMD6Q96NE9 622 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 ASB16Q96NS5 453 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 ZIM2Q9NZV7 527 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 BCORQ6W2J9 1755 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 ABCC11Q96J66 1382 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 PABPN1LA6NDY0 278 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 TNFRSF10BO14763 440 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 ATP9BO43861 1147 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 ALDH1L1O75891 902 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 XRCC5P13010 732 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 YBX3P16989 372 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHD9-216ENST00000565803 NDUFV2P19404 249 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 CTCFP49711 727 aaPredicted RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 ALDH1L2Q3SY69 923 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 DNTTIP2Q5QJE6 756 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 ADGRD1Q6QNK2 874 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 PPARGC1BQ86YN6 1023 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 CPLX3Q8WVH0 158 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 E2F7Q96AV8 911 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 HMX1Q9NP08 348 aaPredicted RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 MRPS23Q9Y3D9 190 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 GJA3Q9Y6H8 435 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 COL5A2P05997 1499 aaPredicted RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 MAP2P11137 1827 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 USP17L3A6NCW0 530 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 USP17L4A6NCW7 530 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 LILRB3O75022 631 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 SCGB1D2O95969 90 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 P4HBP07237 508 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 SLC10A3P09131 477 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 CASQ1P31415 396 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 FLT3P36888 993 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 PSEN2P49810 448 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 BIRC3Q13489 604 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 Q3C1V9 767 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 CCDC93Q567U6 631 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 USP17L2Q6R6M4 530 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 USP17L1Q7RTZ2 530 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 EGFL6Q8IUX8 553 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 RPGRQ92834 1020 aaKnown RBP3.66□□□□□ -1.82
CHD9-216ENST00000565803 MTMR8Q96EF0 704 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 SEPT3Q9UH03 358 aa3.66□□□□□ -1.82
CHD9-216ENST00000565803 IFRD1O00458 451 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 FYB1O15117 783 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 NBNO60934 754 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 ADAMTS2O95450 1211 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 EIF4G2P78344 907 aaKnown RBP eCLIP3.65□□□□□ -1.82
CHD9-216ENST00000565803 FANCCQ00597 558 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 NAA30Q147X3 362 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 E2F5Q15329 346 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 PROX2Q3B8N5 592 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 IL31Q6EBC2 164 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 ALKBH2Q6NS38 261 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 UBE2Q1Q7Z7E8 422 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 JAMLQ86YT9 394 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 MYO1HQ8N1T3 1032 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 GTF3C2Q8WUA4 911 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 SPIRE2Q8WWL2 714 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 ANAPC16Q96DE5 110 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 THAP11Q96EK4 314 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 C8orf48Q96LL4 319 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 ALDH8A1Q9H2A2 487 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 SUDS3Q9H7L9 328 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 CHST12Q9NRB3 414 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 EIF3AQ14152 1382 aaKnown RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 RASSF10A6NK89 507 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 TRIM37O94972 964 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 NFX1Q12986 1120 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms