RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 GJA5P36382 358 aa15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 FKBP1CQ5VVH2 108 aa15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 CEP85Q6P2H3 762 aa15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 MCOLN1Q9GZU1 580 aa15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 HMG20BQ9P0W2 317 aa15.18■□□□□ 0.02
SEMA4B-220ENST00000561321 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 MS4A1P11836 297 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 NFIAQ12857 509 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 VGLL4Q14135 290 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 TNNI3KQ59H18 835 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 OPTNQ96CV9 577 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 CSADQ9Y600 493 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 FPGT-TNNI3KV9GXZ4 949 aa15.17■□□□□ 0.02
SEMA4B-220ENST00000561321 ZBTB22O15209 634 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 MCAMP43121 646 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 MIGA2Q7L4E1 593 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 SLF2Q8IX21 1173 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 WRNIP1Q96S55 665 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 DBNDD2Q9BQY9 259 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
SEMA4B-220ENST00000561321 RPAP1Q9BWH6 1393 aaPredicted RBP15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 CCDC85CA6NKD9 419 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 UQCRFS1P1P0C7P4 283 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 BTDP43251 543 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 MECOMQ03112 1051 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 RAI14Q9P0K7 980 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 FAM198AQ9UFP1 575 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 GAKO14976 1311 aa15.15■□□□□ 0.02
SEMA4B-220ENST00000561321 IGF2BP3O00425 579 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 INHBEP58166 350 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 DCAF15Q66K64 600 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 ZNF296Q8WUU4 475 aaPredicted RBP15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 ZNF341Q9BYN7 854 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 R3HDMLQ9H3Y0 253 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
SEMA4B-220ENST00000561321 LAMB1P07942 1786 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 GPR25O00155 361 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 ALDH1A1P00352 501 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 RGS3P49796 1198 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 PICALMQ13492 652 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 ZNF384Q8TF68 577 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 CCDC8Q9H0W5 538 aaPredicted RBP15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 DDX19BQ9UMR2 479 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 SNCAIPQ9Y6H5 919 aa15.13■□□□□ 0.01
SEMA4B-220ENST00000561321 GSTO1P78417 241 aa15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 CTU1Q7Z7A3 348 aaKnown RBP15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 ZSCAN29Q8IWY8 852 aaPredicted RBP15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 BCL11AQ9H165 835 aa15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
SEMA4B-220ENST00000561321 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 APBB1O00213 710 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 INPP5BP32019 993 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 EAF2Q96CJ1 260 aaPredicted RBP15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 PTPN18Q99952 460 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 IDI2Q9BXS1 227 aa15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
SEMA4B-220ENST00000561321 GPR75-ASB3A0A0A6YYF3 556 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 CCL15-CCL14A0A0B4J2E2 113 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 SPDYE5A6NIY4 337 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 FKTNO75072 461 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 WDHD1O75717 1129 aaPredicted RBP15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 LDHCP07864 332 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 GTF2A2P52657 109 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 CCL15Q16663 113 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 C20orf194Q5TEA3 1177 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 ERO1BQ86YB8 467 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 BRI3BPQ8WY22 251 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 CFHR5Q9BXR6 569 aa15.1■□□□□ 0.01
SEMA4B-220ENST00000561321 IL1RAPL2Q9NP60 686 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms