RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	ACE	P12821	1306 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	GPR182	O15218	404 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	IGHA2	P01877	340 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	ZC3H6	P61129	1189 aa	Known RBP	10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	CHRNA2	Q15822	529 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	DEFB132	Q7Z7B7	95 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	NLRP13	Q86W25	1043 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	ELP3	Q9H9T3	547 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	PLCH1	Q4KWH8	1693 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	ALS2	Q96Q42	1657 aa		10.08	□□□□□ -0.8
MARK3-223	ENST00000561071	NEURL1B	A8MQ27	555 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	MMP20	O60882	483 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	PDE12	Q6L8Q7	609 aa	Known RBP	10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	CITED4	Q96RK1	184 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	PRDM11	Q9NQV5	511 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	GGA1	Q9UJY5	639 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	SRCAP	Q6ZRS2	3230 aa		10.07	□□□□□ -0.8
MARK3-223	ENST00000561071	BRWD3	Q6RI45	1802 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	ARAF	P10398	606 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	EHHADH	Q08426	723 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	XKR5	Q6UX68	686 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	KRT27	Q7Z3Y8	459 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	ACD	Q96AP0	544 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	ASB16	Q96NS5	453 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	IGFLR1	Q9H665	355 aa		10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.06	□□□□□ -0.8
MARK3-223	ENST00000561071	KIAA0232	Q92628	1395 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	MFAP1	P55081	439 aa	Known RBP	10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	TBC1D8B	Q0IIM8	1120 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	PDE3B	Q13370	1112 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	FCHSD1	Q86WN1	690 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	NIF3L1	Q9GZT8	377 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	AVEN	Q9NQS1	362 aa	Predicted RBP	10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	ABI2	Q9NYB9	513 aa	Predicted RBP	10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	CNTN3	Q9P232	1028 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	SPATA31A5	Q5VU36	1347 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	SPATA31A7	Q8IWB4	1347 aa		10.05	□□□□□ -0.8
MARK3-223	ENST00000561071	NWD2	Q9ULI1	1742 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	POLR3A	O14802	1390 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	SIN3B	O75182	1162 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	TNFRSF21	O75509	655 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	CYP2E1	P05181	493 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	SLURP2	P0DP57	97 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	ADH6	P28332	368 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	DHX32	Q7L7V1	743 aa	Known RBP	10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	EFCC1	Q9HA90	598 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	PODXL2	Q9NZ53	605 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	KIAA1210	Q9ULL0	1709 aa		10.04	□□□□□ -0.8
MARK3-223	ENST00000561071	BLM	P54132	1417 aa	Predicted RBP	10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	PPIP5K1	Q6PFW1	1433 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	NRAP	Q86VF7	1730 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	C1orf127	Q8N9H9	656 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	WHAMM	Q8TF30	809 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	DMRTB1	Q96MA1	342 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	TLR7	Q9NYK1	1049 aa	Known RBP	10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	USP35	Q9P2H5	1018 aa		10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	COL14A1	Q05707	1796 aa	Known RBP	10.03	□□□□□ -0.8
MARK3-223	ENST00000561071	ITSN1	Q15811	1721 aa		10.02	□□□□□ -0.8
MARK3-223	ENST00000561071	CRYBG1	Q9Y4K1	1723 aa		10.02	□□□□□ -0.8
MARK3-223	ENST00000561071	ANKRD33B	A6NCL7	494 aa		10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	MAP3K6	O95382	1288 aa		10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	ORC1	Q13415	861 aa		10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	LYPD4	Q6UWN0	246 aa		10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	UBE2O	Q9C0C9	1292 aa	Known RBP	10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	GDF2	Q9UK05	429 aa	Predicted RBP	10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.02	□□□□□ -0.81
MARK3-223	ENST00000561071	ZBTB42	B2RXF5	422 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	TREH	O43280	583 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	EVA1C	P58658	441 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	MLLT1	Q03111	559 aa	Predicted RBP	10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	SLCO4C1	Q6ZQN7	724 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	GOLGA6L1	Q8N7Z2	621 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	OR13H1	Q8NG92	308 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	TNFRSF25	Q93038	417 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	CHRD	Q9H2X0	955 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	DNAJB12	Q9NXW2	375 aa	Known RBP	10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	TOPAZ1	Q8N9V7	1692 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	SPATA31A1	Q5TZJ5	1347 aa		10.01	□□□□□ -0.81
MARK3-223	ENST00000561071	WIPF1	O43516	503 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	GC	P02774	474 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	PSAP	P07602	524 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	DSC3	Q14574	896 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	SNX29	Q8TEQ0	813 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	ALKBH8	Q96BT7	664 aa	Known RBP	10	□□□□□ -0.81
MARK3-223	ENST00000561071	NSUN5	Q96P11	429 aa	Known RBP	10	□□□□□ -0.81
MARK3-223	ENST00000561071	KANSL3	Q9P2N6	904 aa		10	□□□□□ -0.81
MARK3-223	ENST00000561071	ROCK2	O75116	1388 aa	Known RBP	10	□□□□□ -0.81
MARK3-223	ENST00000561071	PHRF1	Q9P1Y6	1649 aa	Known RBP	10	□□□□□ -0.81
MARK3-223	ENST00000561071	QRICH2	Q9H0J4	1663 aa		9.99	□□□□□ -0.81
MARK3-223	ENST00000561071	EREG	O14944	169 aa		9.99	□□□□□ -0.81
MARK3-223	ENST00000561071	PHACTR2	O75167	634 aa		9.99	□□□□□ -0.81
MARK3-223	ENST00000561071	CELA2B	P08218	269 aa	Predicted RBP	9.99	□□□□□ -0.81
MARK3-223	ENST00000561071	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.99	□□□□□ -0.81

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