RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 IFNL3Q8IZI9 196 aa13.47□□□□□ -0.25
SNX1-212ENST00000560861 NLGN2Q8NFZ4 835 aa13.47□□□□□ -0.25
SNX1-212ENST00000560861 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
SNX1-212ENST00000560861 KCNQ5Q9NR82 932 aa13.47□□□□□ -0.25
SNX1-212ENST00000560861 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 YDJCA8MPS7 323 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.25
SNX1-212ENST00000560861 NFKBIEO00221 500 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 GSTO1P78417 241 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 STRIP1Q5VSL9 837 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.25
SNX1-212ENST00000560861 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 ALDH8A1Q9H2A2 487 aaPredicted RBP13.46□□□□□ -0.25
SNX1-212ENST00000560861 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
SNX1-212ENST00000560861 E7EWF7 191 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 ST18O60284 1047 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 LDHCP07864 332 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 CPA1P15085 419 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 CASTP20810 708 aaKnown RBP13.45□□□□□ -0.26
SNX1-212ENST00000560861 RPS6KB1P23443 525 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 PSMA5P28066 241 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 MXD3Q9BW11 206 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
SNX1-212ENST00000560861 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
SNX1-212ENST00000560861 IMMTQ16891 758 aaKnown RBP13.44□□□□□ -0.26
SNX1-212ENST00000560861 TBC1D10CQ8IV04 446 aa13.44□□□□□ -0.26
SNX1-212ENST00000560861 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
SNX1-212ENST00000560861 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
SNX1-212ENST00000560861 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
SNX1-212ENST00000560861 AATFQ9NY61 560 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNX1-212ENST00000560861 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
SNX1-212ENST00000560861 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
SNX1-212ENST00000560861 USP17L3A6NCW0 530 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
SNX1-212ENST00000560861 MCM2P49736 904 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 AK2P54819 239 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 RHBDL3P58872 404 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 HAND2P61296 217 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 EXOSC10Q01780 885 aaKnown RBP13.43□□□□□ -0.26
SNX1-212ENST00000560861 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
SNX1-212ENST00000560861 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 MRIQ9BWK5 157 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 CRNKL1Q9BZJ0 848 aaKnown RBP13.43□□□□□ -0.26
SNX1-212ENST00000560861 ANAPC4Q9UJX5 808 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 CYP46A1Q9Y6A2 500 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 MYH1P12882 1939 aa13.43□□□□□ -0.26
SNX1-212ENST00000560861 G3V3G9 751 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 DDIT3P35638 169 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 BTDP43251 543 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 PRELPP51888 382 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
SNX1-212ENST00000560861 CUL4AQ13619 759 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 HHIPL2Q6UWX4 724 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 SH3RF3Q8TEJ3 882 aaPredicted RBP13.42□□□□□ -0.26
SNX1-212ENST00000560861 GMLQ99445 158 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 NAPBQ9H115 298 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 DCP1AQ9NPI6 582 aaPredicted RBP13.42□□□□□ -0.26
SNX1-212ENST00000560861 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 SBF1O95248 1867 aa13.42□□□□□ -0.26
SNX1-212ENST00000560861 ZNF213O14771 459 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 APPP05067 770 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 FGRP09769 529 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 ANTXR2P58335 489 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 TOB2Q14106 344 aaPredicted RBP13.41□□□□□ -0.26
SNX1-212ENST00000560861 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
SNX1-212ENST00000560861 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 TMX3Q96JJ7 454 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 SYT17Q9BSW7 474 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 ZNRF3Q9ULT6 936 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
SNX1-212ENST00000560861 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
SNX1-212ENST00000560861 WDR19Q8NEZ3 1342 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 SMIM22K7EJ46 135 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 BAG3O95817 575 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
SNX1-212ENST00000560861 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
SNX1-212ENST00000560861 TDO2P48775 406 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 PPARAQ07869 468 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 CTR9Q6PD62 1173 aa13.4□□□□□ -0.26
SNX1-212ENST00000560861 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms