RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 TBC1D8BQ0IIM8 1120 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 B4GALNT4Q76KP1 1039 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 LLPHQ9BRT6 129 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 ZBTB7BO15156 539 aaPredicted RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 INTS8Q75QN2 995 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 TRAF5O00463 557 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 DPH6Q7L8W6 267 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.2□□□□□ -0.14
SYNM-203ENST00000560674 TRIM7Q9C029 511 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 KCNH3Q9ULD8 1083 aa14.2□□□□□ -0.14
SYNM-203ENST00000560674 RIOK3O14730 519 aaKnown RBP14.19□□□□□ -0.14
SYNM-203ENST00000560674 C8orf74Q6P047 294 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 GBP6Q6ZN66 633 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 HELBQ8NG08 1087 aaPredicted RBP14.19□□□□□ -0.14
SYNM-203ENST00000560674 SLC27A2O14975 620 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 VPS16Q9H269 839 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 EPB41P11171 864 aaKnown RBP14.19□□□□□ -0.14
SYNM-203ENST00000560674 ZNF75DP51815 510 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
SYNM-203ENST00000560674 FANCCQ00597 558 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 PLS1Q14651 629 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 PPFIBP2Q8ND30 876 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 DEXIO95424 95 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 FRMD4BQ9Y2L6 1034 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 PARP1P09874 1014 aaKnown RBP14.19□□□□□ -0.14
SYNM-203ENST00000560674 TMEM87BQ96K49 555 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 FAM169AQ9Y6X4 670 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 TNRQ92752 1358 aa14.19□□□□□ -0.14
SYNM-203ENST00000560674 MBD4O95243 580 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 PDE4DQ08499 809 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
SYNM-203ENST00000560674 NFATC2IPQ8NCF5 419 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
SYNM-203ENST00000560674 A0A1B0GUL7 405 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 VIMP08670 466 aaKnown RBP14.18□□□□□ -0.14
SYNM-203ENST00000560674 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
SYNM-203ENST00000560674 SYNRGQ9UMZ2 1314 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 HPDP32754 393 aaPredicted RBP14.18□□□□□ -0.14
SYNM-203ENST00000560674 CCDC14Q49A88 953 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 CNNM4Q6P4Q7 775 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
SYNM-203ENST00000560674 IMPACTQ9P2X3 320 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 AKNAD1Q5T1N1 836 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 IFT74Q96LB3 600 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
SYNM-203ENST00000560674 ZNF445P59923 1031 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 RAPGEF6Q8TEU7 1601 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 AOX1Q06278 1338 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 DUOX2Q9NRD8 1548 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 NOL3O60936 208 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 LDHBP07195 334 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 CARD6Q9BX69 1037 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 CSRNP2Q9H175 543 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 INF2Q27J81 1249 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 CEP128Q6ZU80 1094 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 CCDC110Q8TBZ0 833 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.14
SYNM-203ENST00000560674 SWAP70Q9UH65 585 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 B4DLN1 442 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 MRPL12P52815 198 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 STMN2Q93045 179 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 NDUFAB1O14561 156 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 CUTAO60888 179 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 NCBP1Q09161 790 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 UTP14CQ5TAP6 766 aaKnown RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 RRAGDQ9NQL2 400 aaPredicted RBP14.17□□□□□ -0.14
SYNM-203ENST00000560674 ZBTB21Q9ULJ3 1066 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 NPATQ14207 1427 aa14.17□□□□□ -0.14
SYNM-203ENST00000560674 B4E1Z4 1266 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 ACTN4O43707 911 aaKnown RBP14.16□□□□□ -0.14
SYNM-203ENST00000560674 SPOPO43791 374 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 MYRIPQ8NFW9 859 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 A6NNZ2 444 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 TNFAIP3P21580 790 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 TUBB8Q3ZCM7 444 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 MLKLQ8NB16 471 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 MAK16Q9BXY0 300 aaKnown RBP14.16□□□□□ -0.14
SYNM-203ENST00000560674 CIB2O75838 187 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 PAXIP1Q6ZW49 1069 aaPredicted RBP14.16□□□□□ -0.14
SYNM-203ENST00000560674 GOLGA6CA6NDK9 693 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 GOLGA6DP0CG33 693 aa14.16□□□□□ -0.14
SYNM-203ENST00000560674 NLRP12P59046 1061 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms