RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CDK11BP21127 795 aaKnown RBP7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 IGFBP4P22692 258 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 GDF10P55107 478 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 UBE2HP62256 183 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 GNAI1P63096 354 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 LMOD3Q0VAK6 560 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 PKP1Q13835 747 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 GAS6Q14393 721 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 ZNF771Q7L3S4 317 aaPredicted RBP7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 FBXO33Q7Z6M2 555 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 SIRT2Q8IXJ6 389 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 ZGPATQ8N5A5 531 aaKnown RBP7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 TMX3Q96JJ7 454 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 FUCA2Q9BTY2 467 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 C14orf93Q9H972 538 aaKnown RBP7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 FAM53CQ9NYF3 392 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 CTNNA3Q9UI47 895 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 ATP6V1DQ9Y5K8 247 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 DLG5Q8TDM6 1919 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 ABCC3O15438 1527 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 CCDC171Q6TFL3 1326 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 TMEM229AB2RXF0 380 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 FOXO3O43524 673 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 NDUFB5O43674 189 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 VAMP4O75379 141 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 SLFN14P0C7P3 912 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 MPSTP25325 297 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 GRM5P41594 1212 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 NCBP1Q09161 790 aaKnown RBP7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 KRT222Q8N1A0 295 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 RNF214Q8ND24 703 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 ZNF397Q8NF99 534 aaPredicted RBP7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 TIGD1Q96MW7 591 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 TMPRSS4Q9NRS4 437 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 NAP1L2Q9ULW6 460 aaPredicted RBP7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 NSFL1CQ9UNZ2 370 aaKnown RBP7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 UGGT1Q9NYU2 1555 aa7.07□□□□□ -1.28
SNRPA1-209ENST00000560307 AOX1Q06278 1338 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 TULP2O00295 520 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 PPP1R12BO60237 982 aaPredicted RBP7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 ZNF853P0CG23 659 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 SDSP20132 328 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 FSHRP23945 695 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 U2AF2P26368 475 aaKnown RBP eCLIP7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 ECM1Q16610 540 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 TAF7LQ5H9L4 462 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 TBCELQ5QJ74 424 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 RGL4Q8IZJ4 473 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 SLC12A5Q9H2X9 1139 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 SEMA6BQ9H3T3 888 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 ADGRL3Q9HAR2 1447 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 NRKQ7Z2Y5 1582 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 CRYBG1Q9Y4K1 1723 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 PREX1Q8TCU6 1659 aa7.06□□□□□ -1.28
SNRPA1-209ENST00000560307 KIF2AO00139 706 aaPredicted RBP7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 NEMFO60524 1076 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 DIAPH1O60610 1272 aaKnown RBP7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 HMMRO75330 724 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 CDC25BP30305 580 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 TERF2Q15554 542 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 NFE2L2Q16236 605 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 USP48Q86UV5 1035 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 COL26A1Q96A83 441 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 TTC12Q9H892 705 aaPredicted RBP7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 GOLGA2P5Q9HBQ8 144 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 KCND1Q9NSA2 647 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 A0A1W2PP64 1363 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 KIAA0232Q92628 1395 aa7.05□□□□□ -1.28
SNRPA1-209ENST00000560307 ATP7BP35670 1465 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 CD163L1Q9NR16 1453 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 PTPRCP08575 1304 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 CAVIN2O95810 425 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 RECKO95980 971 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 TUBB4AP04350 444 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 P4HBP07237 508 aaKnown RBP7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 MAPK8P45983 427 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 SCNN1DP51172 638 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 ERVK-9P63128 1117 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 DHX8Q14562 1220 aaKnown RBP7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 C16orf46Q6P387 395 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 KIF18AQ8NI77 898 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 ESYT1Q9BSJ8 1104 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 MBIPQ9NS73 344 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 KIDINS220Q9ULH0 1771 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 ARHGEF10O15013 1369 aa7.04□□□□□ -1.28
SNRPA1-209ENST00000560307 SALL3Q9BXA9 1300 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 RIMS2Q9UQ26 1411 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 U2SURPO15042 1029 aaKnown RBP7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 SPINT1O43278 529 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 INHAP05111 366 aa7.03□□□□□ -1.28
SNRPA1-209ENST00000560307 CCDC192P0DO97 292 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms