RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
HMBOX1-213ENST00000560269 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
HMBOX1-213ENST00000560269 FOCADQ5VW36 1801 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 CDK5RAP2Q96SN8 1893 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 PLCG2P16885 1265 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 GNAT2P19087 354 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 RHBDL3P58872 404 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 CFAP100Q494V2 611 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 KIAA1211Q6ZU35 1233 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 ZBED3Q96IU2 234 aaPredicted RBP16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 DSCC1Q9BVC3 393 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 ANO2Q9NQ90 1003 aa16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 RPAP1Q9BWH6 1393 aaPredicted RBP16.36■□□□□ 0.21
HMBOX1-213ENST00000560269 FOXP2O15409 715 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 HSPD1P10809 573 aaKnown RBP16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 PTH1RQ03431 593 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 VPS53Q5VIR6 699 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 MICALL2Q8IY33 904 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 USP26Q9BXU7 913 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 PCDHAC2Q9Y5I4 1007 aa16.35■□□□□ 0.21
HMBOX1-213ENST00000560269 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 GLTPD2A6NH11 291 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 RBM5P52756 815 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 MYOZ2Q9NPC6 264 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
HMBOX1-213ENST00000560269 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 H7C1D1 291 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 PRKAB2O43741 272 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 ALX1Q15699 326 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 WDR90Q96KV7 1748 aa16.33■□□□□ 0.2
HMBOX1-213ENST00000560269 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
HMBOX1-213ENST00000560269 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 SCN4AP35499 1836 aa16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
HMBOX1-213ENST00000560269 WNT10BO00744 389 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 EGFRP00533 1210 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 FGAP02671 866 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 APPP05067 770 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 EPS15P42566 896 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 DCP1AQ9NPI6 582 aaPredicted RBP16.3■□□□□ 0.2
HMBOX1-213ENST00000560269 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 HSPA4P34932 840 aa16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 USP5P45974 858 aa16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 ZNF70Q9UC06 446 aaPredicted RBP16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
HMBOX1-213ENST00000560269 LAMB1P07942 1786 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 FLT1P17948 1338 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 MYH1P12882 1939 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 MYO1BO43795 1136 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 RBM26Q5T8P6 1007 aaKnown RBP16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 KCNB2Q92953 911 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 NAPBQ9H115 298 aa16.28■□□□□ 0.2
HMBOX1-213ENST00000560269 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms