RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 GBA2Q9HCG7 927 aaPredicted RBP11.44□□□□□ -0.58
LDLR-211ENST00000560173 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
LDLR-211ENST00000560173 SSC5DA1L4H1 1573 aa11.44□□□□□ -0.58
LDLR-211ENST00000560173 PAPPA2Q9BXP8 1791 aa11.44□□□□□ -0.58
LDLR-211ENST00000560173 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 CACNB3P54284 484 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 FKBP1BP68106 108 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 RASA3Q14644 834 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
LDLR-211ENST00000560173 BCL11AQ9H165 835 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 TMOD2Q9NZR1 351 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 RAI14Q9P0K7 980 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 LRP2BPQ9P2M1 347 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
LDLR-211ENST00000560173 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 IGSF3O75054 1194 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 HUNKP57058 714 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
LDLR-211ENST00000560173 GSTO1P78417 241 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 C2orf69Q8N8R5 385 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 TEPSINQ96N21 525 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 MYH2Q9UKX2 1941 aa11.42□□□□□ -0.58
LDLR-211ENST00000560173 GPR75-ASB3A0A0A6YYF3 556 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 LDHCP07864 332 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 ATP5JP18859 108 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 NF2P35240 595 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 BTDP43251 543 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 TNNI2P48788 182 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 NFIAQ12857 509 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 NBPF12Q5TAG4 269 aaPredicted RBP11.41□□□□□ -0.58
LDLR-211ENST00000560173 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 CDAN1Q8IWY9 1227 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 USP40Q9NVE5 1235 aa11.41□□□□□ -0.58
LDLR-211ENST00000560173 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
LDLR-211ENST00000560173 DOCK2Q92608 1830 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 CASP8AP2Q9UKL3 1982 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 IDH1O75874 414 aaKnown RBP11.4□□□□□ -0.58
LDLR-211ENST00000560173 RHBDL3P58872 404 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 SUPT20HL1Q3ZLR7 823 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.58
LDLR-211ENST00000560173 CYP4F22Q6NT55 531 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 CAPNS2Q96L46 248 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 HAUS7Q99871 368 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 RWDD1Q9H446 243 aaPredicted RBP11.4□□□□□ -0.58
LDLR-211ENST00000560173 ECHDC1Q9NTX5 307 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.58
LDLR-211ENST00000560173 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 GOLIM4O00461 696 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 ECE1P42892 770 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 TTLL12Q14166 644 aaPredicted RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 ARMC9Q7Z3E5 817 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 OTUD7AQ8TE49 926 aaPredicted RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 FAM151AQ8WW52 585 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 DNAJC2Q99543 621 aaKnown RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 IDI2Q9BXS1 227 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 BOLA2Q9H3K6 86 aa11.39□□□□□ -0.59
LDLR-211ENST00000560173 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
LDLR-211ENST00000560173 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
LDLR-211ENST00000560173 IGHDP01880 384 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 RGS3P49796 1198 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 MAP3K12Q12852 859 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 PRKG1Q13976 671 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
LDLR-211ENST00000560173 MAP3K11Q16584 847 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 LDLRAD1Q5T700 205 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 ANKRD45Q5TZF3 282 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 TSHZ3Q63HK5 1081 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 TMED8Q6PL24 325 aaPredicted RBP11.38□□□□□ -0.59
LDLR-211ENST00000560173 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 PAG1Q9NWQ8 432 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
LDLR-211ENST00000560173 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 FAM155AB1AL88 458 aaPredicted RBP11.37□□□□□ -0.59
LDLR-211ENST00000560173 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
LDLR-211ENST00000560173 ENTPD3O75355 529 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
LDLR-211ENST00000560173 SLC10A3P09131 477 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 PDE6AP16499 860 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 CYP7A1P22680 504 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 ZNF157P51786 506 aaPredicted RBP11.37□□□□□ -0.59
LDLR-211ENST00000560173 PPP4CP60510 307 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 TCP10Q12799 353 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 GRM1Q13255 1194 aa11.37□□□□□ -0.59
LDLR-211ENST00000560173 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms