RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ASB16Q96NS5 453 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 GMLQ99445 158 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 TGIF2Q9GZN2 237 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 GOLGA2P5Q9HBQ8 144 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 PCMTD2Q9NV79 361 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 ACAD8Q9UKU7 415 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 PRKAB1Q9Y478 270 aa5.48□□□□□ -1.53
HMGB3P26-201ENST00000560051 PABPN1LA6NDY0 278 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 GOLGA6L3A6NEY3 463 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 IFRD1O00458 451 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 DNAJC6O75061 913 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 FOSP01100 380 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 FGAP02671 866 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 NFKB1P19838 968 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 DNAJA1P31689 397 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 IREB2P48200 963 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 TNNI2P48788 182 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 PSMD2Q13200 908 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 GNL2Q13823 731 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 RAPGEF1Q13905 1077 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ELMSAN1Q6PJG2 1045 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 IGF2-ASQ6U949 168 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 FBXO11Q86XK2 927 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZNF513Q8N8E2 541 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 GAS2L2Q8NHY3 880 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ENOX1Q8TC92 643 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 CHMP7Q8WUX9 453 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ITFG2Q969R8 447 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 NGLY1Q96IV0 654 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZNF830Q96NB3 372 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 OSBPL2Q9H1P3 480 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ACBD3Q9H3P7 528 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 SUDS3Q9H7L9 328 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ZNF69Q9UC07 566 aa5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 PUF60Q9UHX1 559 aaKnown RBP5.47□□□□□ -1.53
HMGB3P26-201ENST00000560051 ATAD2Q6PL18 1390 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 NPHP1O15259 732 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 VAMP4O75379 141 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 HNRNPCP07910 306 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 CPB1P15086 417 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 MAPK1P28482 360 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 TXKP42681 527 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 CD151P48509 253 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 HLTFQ14527 1009 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 EAPPQ56P03 285 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 UTP14CQ5TAP6 766 aaKnown RBP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 OGFOD1Q8N543 542 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 TMEM87AQ8NBN3 555 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 CLP1Q92989 425 aaKnown RBP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZNF512BQ96KM6 892 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 GSX2Q9BZM3 304 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCSER2Q9H7U1 834 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 TMEM51Q9NW97 253 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 SMC3Q9UQE7 1217 aa5.46□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCDC163A0A0D9SF12 145 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L3A6NCW0 530 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L4A6NCW7 530 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 ZBTB7BO15156 539 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 KIF1CO43896 1103 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 PTCD1O75127 700 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 HIP1RO75146 1068 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 CAND2O75155 1236 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 FOSL1P15407 271 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 COL19A1Q14993 1142 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L2Q6R6M4 530 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 USP17L1Q7RTZ2 530 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 UBE2Q1Q7Z7E8 422 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 PLEKHM2Q8IWE5 1019 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 STAG2Q8N3U4 1231 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 TEX19Q8NA77 164 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 TSEN2Q8NCE0 465 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 DCAF11Q8TEB1 546 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 RSPH1Q8WYR4 309 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 GOLGA1Q92805 767 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCDC47Q96A33 483 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 SSBP4Q9BWG4 385 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 RANBP17Q9H2T7 1088 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 TSPY26PQ9H489 355 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 FRRS1LQ9P0K9 344 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 MKRN1Q9UHC7 482 aaKnown RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 LZTS1Q9Y250 596 aa5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 CTDP1Q9Y5B0 961 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P26-201ENST00000560051 LDHCP07864 332 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 ATP2B4P23634 1241 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 HMGN5P82970 282 aaKnown RBP5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 FANCCQ00597 558 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 TMED1Q13445 227 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 BRD3Q15059 726 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 IER5Q5VY09 327 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 CC2D1AQ6P1N0 951 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 POTEAQ6S8J7 498 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 OTUD6AQ7L8S5 288 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 HSCBQ8IWL3 235 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 CCDC89Q8N998 374 aa5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 SCG3Q8WXD2 468 aaKnown RBP5.44□□□□□ -1.54
HMGB3P26-201ENST00000560051 JDP2Q8WYK2 163 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms