RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 SREBF2Q12772 1141 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 DGKZQ13574 1117 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 RASGRF1Q13972 1273 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 FKBP1CQ5VVH2 108 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
IDH3A-217ENST00000559889 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 FAM83AQ86UY5 434 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 R3HDMLQ9H3Y0 253 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
IDH3A-217ENST00000559889 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 DAGLAQ9Y4D2 1042 aa11.2□□□□□ -0.62
IDH3A-217ENST00000559889 TNNI2P48788 182 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 XAGE2Q96GT9 111 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
IDH3A-217ENST00000559889 DDX19BQ9UMR2 479 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 CENPFP49454 3210 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 AAMPQ13685 434 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 POLA2Q14181 598 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.19□□□□□ -0.62
IDH3A-217ENST00000559889 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
IDH3A-217ENST00000559889 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 LDHBP07195 334 aaKnown RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 ZNF296Q8WUU4 475 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 MYH13Q9UKX3 1938 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 OTOFQ9HC10 1997 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 LAMB1P07942 1786 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 INHBEP58166 350 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 VGLL4Q14135 290 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 IFNL1Q8IU54 200 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
IDH3A-217ENST00000559889 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-217ENST00000559889 GPR25O00155 361 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 NFIAQ12857 509 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 OPTNQ96CV9 577 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 PTPN18Q99952 460 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 C1orf115Q9H7X2 142 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 TMOD2Q9NZR1 351 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 RPAP1Q9BWH6 1393 aaPredicted RBP11.17□□□□□ -0.62
IDH3A-217ENST00000559889 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
IDH3A-217ENST00000559889 CCDC85CA6NKD9 419 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 ATP8B2P98198 1209 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
IDH3A-217ENST00000559889 GAKO14976 1311 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 PI16Q6UXB8 463 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 ZNF384Q8TF68 577 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 FAM151AQ8WW52 585 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 ALDH1A1P00352 501 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 G3BP1Q13283 466 aaKnown RBP eCLIP11.16□□□□□ -0.62
IDH3A-217ENST00000559889 CTU1Q7Z7A3 348 aaKnown RBP11.16□□□□□ -0.62
IDH3A-217ENST00000559889 ZGPATQ8N5A5 531 aaKnown RBP11.16□□□□□ -0.62
IDH3A-217ENST00000559889 HMG20BQ9P0W2 317 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 SNCAIPQ9Y6H5 919 aa11.16□□□□□ -0.62
IDH3A-217ENST00000559889 ARID4AP29374 1257 aaPredicted RBP11.15□□□□□ -0.62
IDH3A-217ENST00000559889 TCP10Q12799 353 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 ZKSCAN4Q969J2 545 aaPredicted RBP11.15□□□□□ -0.62
IDH3A-217ENST00000559889 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
IDH3A-217ENST00000559889 USP40Q9NVE5 1235 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 RFX7Q2KHR2 1363 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
IDH3A-217ENST00000559889 BRCA2P51587 3418 aa11.15□□□□□ -0.63
IDH3A-217ENST00000559889 SPDYE5A6NIY4 337 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 TNRC18O15417 2968 aaPredicted RBP11.14□□□□□ -0.63
IDH3A-217ENST00000559889 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 NOP58Q9Y2X3 529 aaKnown RBP11.14□□□□□ -0.63
IDH3A-217ENST00000559889 CSADQ9Y600 493 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 ATRNL1Q5VV63 1379 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 MCAMP43121 646 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 RGS19P49795 217 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 MECOMQ03112 1051 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 DZIP1Q86YF9 867 aaKnown RBP11.14□□□□□ -0.63
IDH3A-217ENST00000559889 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 ZNF112Q9UJU3 913 aa11.14□□□□□ -0.63
IDH3A-217ENST00000559889 FKTNO75072 461 aa11.13□□□□□ -0.63
IDH3A-217ENST00000559889 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
IDH3A-217ENST00000559889 CRHR2Q13324 411 aa11.13□□□□□ -0.63
IDH3A-217ENST00000559889 TNNI3KQ59H18 835 aa11.13□□□□□ -0.63
IDH3A-217ENST00000559889 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
IDH3A-217ENST00000559889 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
IDH3A-217ENST00000559889 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
IDH3A-217ENST00000559889 FPGT-TNNI3KV9GXZ4 949 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms