RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
USP3-215ENST00000559771 ABT1Q9ULW3 272 aaKnown RBP7.57□□□□□ -1.2
USP3-215ENST00000559771 TLL2Q9Y6L7 1015 aa7.57□□□□□ -1.2
USP3-215ENST00000559771 RTL9Q8NET4 1388 aa7.57□□□□□ -1.2
USP3-215ENST00000559771 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
USP3-215ENST00000559771 AOC2O75106 756 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
USP3-215ENST00000559771 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 CIAPIN1Q6FI81 312 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
USP3-215ENST00000559771 SAPCD2Q86UD0 394 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 SUPT20HQ8NEM7 779 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
USP3-215ENST00000559771 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
USP3-215ENST00000559771 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
USP3-215ENST00000559771 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
USP3-215ENST00000559771 CDHR2Q9BYE9 1310 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 POLR2AP24928 1970 aaKnown RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 PSME4Q14997 1843 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 MLLT3P42568 568 aaPredicted RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 GPSM2P81274 684 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 RDH13Q8NBN7 331 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 BBXQ8WY36 941 aaPredicted RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 GPR101Q96P66 508 aaPredicted RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 DBNDD1Q9H9R9 158 aa7.55□□□□□ -1.2
USP3-215ENST00000559771 CNOT7Q9UIV1 285 aaKnown RBP7.55□□□□□ -1.2
USP3-215ENST00000559771 WTIPA6NIX2 430 aaPredicted RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 PSMD14O00487 310 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 APAF1O14727 1248 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 MAP2K1Q02750 393 aaPredicted RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 NNTQ13423 1086 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 TNIP1Q15025 636 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 TMC4Q7Z404 712 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 C8orf58Q8NAV2 365 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 ZC3H15Q8WU90 426 aaKnown RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 SEC31BQ9NQW1 1179 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 DNMT3LQ9UJW3 386 aa7.54□□□□□ -1.2
USP3-215ENST00000559771 NSFL1CQ9UNZ2 370 aaKnown RBP7.54□□□□□ -1.2
USP3-215ENST00000559771 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 ECE1P42892 770 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 RPS8P62241 208 aaKnown RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 SH3BP2P78314 561 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 GRM1Q13255 1194 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP3-215ENST00000559771 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 CCDC184Q52MB2 194 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 LYPD4Q6UWN0 246 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 TBC1D16Q8TBP0 767 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 DPF2Q92785 391 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 ABHD8Q96I13 439 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 TMX4Q9H1E5 349 aaPredicted RBP7.53□□□□□ -1.2
USP3-215ENST00000559771 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
USP3-215ENST00000559771 ASTN2O75129 1339 aaPredicted RBP7.52□□□□□ -1.2
USP3-215ENST00000559771 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
USP3-215ENST00000559771 TNRC18O15417 2968 aaPredicted RBP7.52□□□□□ -1.21
USP3-215ENST00000559771 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
USP3-215ENST00000559771 ECE2O60344 883 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 OATP04181 439 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 MAP2K2P36507 400 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 TSPYL6Q8N831 410 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 MYD88Q99836 296 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 DAXXQ9UER7 740 aaPredicted RBP7.52□□□□□ -1.21
USP3-215ENST00000559771 ZNF609O15014 1411 aa7.52□□□□□ -1.21
USP3-215ENST00000559771 CASP8AP2Q9UKL3 1982 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 MYH3P11055 1940 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 ADM5C9JUS6 153 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 C6orf229H3BNL8 230 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 H7C1D1 291 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 IGKV5-2P06315 115 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 VIL1P09327 827 aaKnown RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 PAXIP1Q6ZW49 1069 aaPredicted RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 RIC3Q7Z5B4 369 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 GMLQ99445 158 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.51□□□□□ -1.21
USP3-215ENST00000559771 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
USP3-215ENST00000559771 DDX11L8A8MPP1 907 aa7.5□□□□□ -1.21
USP3-215ENST00000559771 RPS12P25398 132 aaKnown RBP7.5□□□□□ -1.21
USP3-215ENST00000559771 ITGB7P26010 798 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms