RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 OVOS2A0A0J9YW53 1432 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 OVOS2Q6IE36 1432 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 CD163L1Q9NR16 1453 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 KCNQ4P56696 695 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
SPG11-213ENST00000558988 CAMKK2Q96RR4 588 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 KCNH4Q9UQ05 1017 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 NDUFB9Q9Y6M9 179 aa10.26□□□□□ -0.77
SPG11-213ENST00000558988 DISP2A7MBM2 1401 aa10.25□□□□□ -0.77
SPG11-213ENST00000558988 PTF1AQ7RTS3 328 aa10.25□□□□□ -0.77
SPG11-213ENST00000558988 GPC6Q9Y625 555 aaPredicted RBP10.25□□□□□ -0.77
SPG11-213ENST00000558988 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
SPG11-213ENST00000558988 LTN1O94822 1766 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
SPG11-213ENST00000558988 NOS2P35228 1153 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 TEAD4Q15561 434 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 MARCH10Q8NA82 808 aaPredicted RBP10.24□□□□□ -0.77
SPG11-213ENST00000558988 CARD10Q9BWT7 1032 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 KRTAP17-1Q9BYP8 105 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 DNAJB12Q9NXW2 375 aaKnown RBP10.24□□□□□ -0.77
SPG11-213ENST00000558988 USP47Q96K76 1375 aa10.24□□□□□ -0.77
SPG11-213ENST00000558988 ALX3O95076 343 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 SPINK2P20155 84 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 OGFOD2Q6N063 350 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 TESK2Q96S53 571 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
SPG11-213ENST00000558988 LRP5O75197 1615 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 NUP188Q5SRE5 1749 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 EXOC5O00471 708 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 FBLN1P23142 703 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 ACSBG1Q96GR2 724 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 COG3Q96JB2 828 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 AKTIPQ9H8T0 292 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 SCHIP1Q9P0W5 487 aaPredicted RBP10.22□□□□□ -0.77
SPG11-213ENST00000558988 ADGRE2Q9UHX3 823 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
SPG11-213ENST00000558988 PEAK1Q9H792 1746 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 SFI1A8K8P3 1242 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 C8AP07357 584 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 TMF1P82094 1093 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 RHPN1Q8TCX5 695 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 ZNF232Q9UNY5 417 aa10.21□□□□□ -0.77
SPG11-213ENST00000558988 RREB1Q92766 1687 aa10.21□□□□□ -0.78
SPG11-213ENST00000558988 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.78
SPG11-213ENST00000558988 IL2RBP14784 551 aa10.2□□□□□ -0.78
SPG11-213ENST00000558988 AMPHP49418 695 aa10.2□□□□□ -0.78
SPG11-213ENST00000558988 SBF2Q86WG5 1849 aa10.2□□□□□ -0.78
SPG11-213ENST00000558988 HSH2DQ96JZ2 352 aa10.2□□□□□ -0.78
SPG11-213ENST00000558988 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
SPG11-213ENST00000558988 TNS2Q63HR2 1409 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 NINLQ9Y2I6 1382 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 GSC2O15499 205 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 KCNQ2O43526 872 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 TYRO3Q06418 890 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 GRIK5Q16478 980 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
SPG11-213ENST00000558988 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
SPG11-213ENST00000558988 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 ABCC6O95255 1503 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 ANKRD36BQ8N2N9 1353 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 MAP3K19Q56UN5 1328 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 DEAF1O75398 565 aaPredicted RBP10.18□□□□□ -0.78
SPG11-213ENST00000558988 RRS1Q15050 365 aaKnown RBP10.18□□□□□ -0.78
SPG11-213ENST00000558988 MTMR14Q8NCE2 650 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
SPG11-213ENST00000558988 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
SPG11-213ENST00000558988 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
SPG11-213ENST00000558988 RAXQ9Y2V3 346 aa10.18□□□□□ -0.78
SPG11-213ENST00000558988 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
SPG11-213ENST00000558988 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
SPG11-213ENST00000558988 ZDHHC13Q8IUH4 622 aa10.17□□□□□ -0.78
SPG11-213ENST00000558988 USHBP1Q8N6Y0 703 aa10.17□□□□□ -0.78
SPG11-213ENST00000558988 IP6K1Q92551 441 aa10.17□□□□□ -0.78
SPG11-213ENST00000558988 DLL1O00548 723 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 PLSCR1O15162 318 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 WNT11O96014 354 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 HOXC9P31274 260 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 TXNRD1Q16881 649 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 WFDC8Q8IUA0 241 aa10.16□□□□□ -0.78
SPG11-213ENST00000558988 CCER1Q8TC90 406 aaPredicted RBP10.16□□□□□ -0.78
SPG11-213ENST00000558988 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
SPG11-213ENST00000558988 BACH1O14867 736 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.78
SPG11-213ENST00000558988 ZBTB7AO95365 584 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 PLAURQ03405 335 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
SPG11-213ENST00000558988 DTX1Q86Y01 620 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 ZNF280CQ8ND82 737 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 PDGFDQ9GZP0 370 aaPredicted RBP10.15□□□□□ -0.78
SPG11-213ENST00000558988 SPON1Q9HCB6 807 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
SPG11-213ENST00000558988 RGPD2P0DJD1 1756 aa10.14□□□□□ -0.79
SPG11-213ENST00000558988 FYB1O15117 783 aa10.14□□□□□ -0.79
SPG11-213ENST00000558988 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms