RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SDSP20132 328 aa15.03■□□□□ -0
GABPB1-208ENST00000558970 BTDP43251 543 aa15.03■□□□□ -0
GABPB1-208ENST00000558970 NOL10Q9BSC4 688 aaKnown RBP15.03■□□□□ -0
GABPB1-208ENST00000558970 BAZ2AQ9UIF9 1905 aaKnown RBP15.02■□□□□ -0
GABPB1-208ENST00000558970 ADD2P35612 726 aa15.02■□□□□ -0
GABPB1-208ENST00000558970 DYNLL1P63167 89 aaKnown RBP15.02■□□□□ -0
GABPB1-208ENST00000558970 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
GABPB1-208ENST00000558970 HHIPL2Q6UWX4 724 aa15.02■□□□□ -0
GABPB1-208ENST00000558970 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
GABPB1-208ENST00000558970 SLF2Q8IX21 1173 aa15.02■□□□□ -0
GABPB1-208ENST00000558970 SMC1BQ8NDV3 1235 aa15.02■□□□□ -0
GABPB1-208ENST00000558970 GGA3Q9NZ52 723 aa15.02■□□□□ -0
GABPB1-208ENST00000558970 MYH1P12882 1939 aa15.02□□□□□ -0.01
GABPB1-208ENST00000558970 MYO1BO43795 1136 aa15.01□□□□□ -0.01
GABPB1-208ENST00000558970 LDHCP07864 332 aa15.01□□□□□ -0.01
GABPB1-208ENST00000558970 HDLBPQ00341 1268 aaKnown RBP15.01□□□□□ -0.01
GABPB1-208ENST00000558970 ZSCAN25Q6NSZ9 544 aa15.01□□□□□ -0.01
GABPB1-208ENST00000558970 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
GABPB1-208ENST00000558970 PNMA8AQ86V59 439 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-208ENST00000558970 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
GABPB1-208ENST00000558970 SEC62Q99442 399 aaKnown RBP15.01□□□□□ -0.01
GABPB1-208ENST00000558970 GAKO14976 1311 aa15□□□□□ -0.01
GABPB1-208ENST00000558970 TCRBV5S4A2TA0A5A2 114 aa15□□□□□ -0.01
GABPB1-208ENST00000558970 TCP10L2B9ZVM9 353 aa15□□□□□ -0.01
GABPB1-208ENST00000558970 RNF113AO15541 343 aaKnown RBP15□□□□□ -0.01
GABPB1-208ENST00000558970 MAP1SQ66K74 1059 aaPredicted RBP15□□□□□ -0.01
GABPB1-208ENST00000558970 CDC42EP5Q6NZY7 148 aa15□□□□□ -0.01
GABPB1-208ENST00000558970 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
GABPB1-208ENST00000558970 USP40Q9NVE5 1235 aa15□□□□□ -0.01
GABPB1-208ENST00000558970 ZNF70Q9UC06 446 aaPredicted RBP15□□□□□ -0.01
GABPB1-208ENST00000558970 MAGEB6P1A0A0J9YX57 407 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 M0R2C6 588 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 MBD4O95243 580 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-208ENST00000558970 PICALMQ13492 652 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 DLK2Q6UY11 383 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 CCDC129Q6ZRS4 1044 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 LCORLQ8N3X6 602 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 MTMR14Q8NCE2 650 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-208ENST00000558970 FAM227BQ96M60 508 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 PUS7LQ9H0K6 701 aaKnown RBP14.99□□□□□ -0.01
GABPB1-208ENST00000558970 ARMT1Q9H993 441 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
GABPB1-208ENST00000558970 GPR75-ASB3A0A0A6YYF3 556 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 A0A0D9SFI3 127 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 ADM5C9JUS6 153 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 BAG3O95817 575 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 TCP10Q12799 353 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
GABPB1-208ENST00000558970 COL13A1Q5TAT6 717 aaPredicted RBP14.98□□□□□ -0.01
GABPB1-208ENST00000558970 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
GABPB1-208ENST00000558970 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 OSBP2Q969R2 916 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 AIDAQ96BJ3 306 aa14.98□□□□□ -0.01
GABPB1-208ENST00000558970 DCPSQ96C86 337 aaKnown RBP14.98□□□□□ -0.01
GABPB1-208ENST00000558970 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
GABPB1-208ENST00000558970 MMP14P50281 582 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 HTRA3P83110 453 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 NFIAQ12857 509 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 UBE3CQ15386 1083 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 BMP2KLQ5H9B9 411 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 TGFBRAP1Q8WUH2 860 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 APPBP2Q92624 585 aa14.97□□□□□ -0.01
GABPB1-208ENST00000558970 GLIS2Q9BZE0 524 aaPredicted RBP14.97□□□□□ -0.01
GABPB1-208ENST00000558970 LAMB1P07942 1786 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 RHBDL3P58872 404 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
GABPB1-208ENST00000558970 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
GABPB1-208ENST00000558970 ZMYM1Q5SVZ6 1142 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 KRT26Q7Z3Y9 468 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 USP48Q86UV5 1035 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 MAPKAPK5Q8IW41 473 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 SDR42E1Q8WUS8 393 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 FAM163AQ96GL9 167 aaPredicted RBP14.96□□□□□ -0.01
GABPB1-208ENST00000558970 TRPM7Q96QT4 1865 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 RIOK1Q9BRS2 568 aaKnown RBP14.96□□□□□ -0.01
GABPB1-208ENST00000558970 MRIQ9BWK5 157 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 PCNTO95613 3336 aa14.96□□□□□ -0.01
GABPB1-208ENST00000558970 MYH8P13535 1937 aa14.96□□□□□ -0.02
GABPB1-208ENST00000558970 GPAA1O43292 621 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 PRKAB2O43741 272 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 USP5P45974 858 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 APOBEC3FQ8IUX4 373 aaKnown RBP14.95□□□□□ -0.02
GABPB1-208ENST00000558970 SULF1Q8IWU6 871 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 TMEM39BQ9GZU3 492 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 ZNF408Q9H9D4 720 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
GABPB1-208ENST00000558970 SAP30BPQ9UHR5 308 aaKnown RBP14.95□□□□□ -0.02
GABPB1-208ENST00000558970 RFX7Q2KHR2 1363 aa14.95□□□□□ -0.02
GABPB1-208ENST00000558970 SIPA1L1O43166 1804 aa14.94□□□□□ -0.02
GABPB1-208ENST00000558970 TRAF5O00463 557 aa14.94□□□□□ -0.02
GABPB1-208ENST00000558970 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
GABPB1-208ENST00000558970 PLCG2P16885 1265 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms