RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MVPQ14764 893 aaKnown RBP21.05■□□□□ 0.96
LRRC28-210ENST00000558879 ZGPATQ8N5A5 531 aaKnown RBP21.05■□□□□ 0.96
LRRC28-210ENST00000558879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.05■□□□□ 0.96
LRRC28-210ENST00000558879 ZBTB7BO15156 539 aaPredicted RBP21.04■□□□□ 0.96
LRRC28-210ENST00000558879 DGKZQ13574 1117 aa21.04■□□□□ 0.96
LRRC28-210ENST00000558879 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.04■□□□□ 0.96
LRRC28-210ENST00000558879 ITPRIPQ8IWB1 547 aa21.04■□□□□ 0.96
LRRC28-210ENST00000558879 SIPA1L1O43166 1804 aa21.04■□□□□ 0.96
LRRC28-210ENST00000558879 ARID4AP29374 1257 aaPredicted RBP21.03■□□□□ 0.96
LRRC28-210ENST00000558879 ATP8B2P98198 1209 aa21.03■□□□□ 0.96
LRRC28-210ENST00000558879 C1orf115Q9H7X2 142 aa21.03■□□□□ 0.96
LRRC28-210ENST00000558879 TBC1D8O95759 1140 aa21.02■□□□□ 0.96
LRRC28-210ENST00000558879 INHBEP58166 350 aa21.02■□□□□ 0.96
LRRC28-210ENST00000558879 G3BP1Q13283 466 aaKnown RBP eCLIP21.02■□□□□ 0.96
LRRC28-210ENST00000558879 VGLL4Q14135 290 aa21.02■□□□□ 0.96
LRRC28-210ENST00000558879 CDC42EP5Q6NZY7 148 aa21.02■□□□□ 0.96
LRRC28-210ENST00000558879 IFNL1Q8IU54 200 aa21.02■□□□□ 0.96
LRRC28-210ENST00000558879 TESPA1A2RU30 521 aaPredicted RBP21.01■□□□□ 0.95
LRRC28-210ENST00000558879 IGF2BP3O00425 579 aaKnown RBP eCLIP21.01■□□□□ 0.95
LRRC28-210ENST00000558879 ALDH1A1P00352 501 aa21.01■□□□□ 0.95
LRRC28-210ENST00000558879 FAM151AQ8WW52 585 aa21.01■□□□□ 0.95
LRRC28-210ENST00000558879 OPTNQ96CV9 577 aa21.01■□□□□ 0.95
LRRC28-210ENST00000558879 ELP3Q9H9T3 547 aa21.01■□□□□ 0.95
LRRC28-210ENST00000558879 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
LRRC28-210ENST00000558879 ATRNL1Q5VV63 1379 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 MAP3K9P80192 1104 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 NFIAQ12857 509 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 ZNF296Q8WUU4 475 aaPredicted RBP21■□□□□ 0.95
LRRC28-210ENST00000558879 HOOK2Q96ED9 719 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 NEUROD6Q96NK8 337 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 HMG20BQ9P0W2 317 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 FAM198AQ9UFP1 575 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 NOP58Q9Y2X3 529 aaKnown RBP21■□□□□ 0.95
LRRC28-210ENST00000558879 SNCAIPQ9Y6H5 919 aa21■□□□□ 0.95
LRRC28-210ENST00000558879 GPR25O00155 361 aa20.99■□□□□ 0.95
LRRC28-210ENST00000558879 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
LRRC28-210ENST00000558879 CTU1Q7Z7A3 348 aaKnown RBP20.99■□□□□ 0.95
LRRC28-210ENST00000558879 ZNF384Q8TF68 577 aa20.99■□□□□ 0.95
LRRC28-210ENST00000558879 FAM163AQ96GL9 167 aaPredicted RBP20.99■□□□□ 0.95
LRRC28-210ENST00000558879 RBBP6Q7Z6E9 1792 aaKnown RBP20.98■□□□□ 0.95
LRRC28-210ENST00000558879 SPDYE5A6NIY4 337 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 MCAMP43121 646 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 TNNI3KQ59H18 835 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 DCAF15Q66K64 600 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 DZIP1Q86YF9 867 aaKnown RBP20.98■□□□□ 0.95
LRRC28-210ENST00000558879 SPATA5Q8NB90 893 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 PANK1Q8TE04 598 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 MS4A4AQ96JQ5 239 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 WRNIP1Q96S55 665 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 IDI2Q9BXS1 227 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 R3HDMLQ9H3Y0 253 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
LRRC28-210ENST00000558879 ABCF2Q9UG63 623 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 CSADQ9Y600 493 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 FPGT-TNNI3KV9GXZ4 949 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 ZSWIM8A7E2V4 1837 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 MROH7-TTC4A0A0A0MT08 1334 aa20.98■□□□□ 0.95
LRRC28-210ENST00000558879 SPTY2D1Q68D10 685 aaPredicted RBP20.97■□□□□ 0.95
LRRC28-210ENST00000558879 USP40Q9NVE5 1235 aa20.97■□□□□ 0.95
LRRC28-210ENST00000558879 MYH1P12882 1939 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
LRRC28-210ENST00000558879 MECOMQ03112 1051 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 TCP10Q12799 353 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 SLF2Q8IX21 1173 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 PTPN18Q99952 460 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 ZNF341Q9BYN7 854 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 MYH7P12883 1935 aa20.96■□□□□ 0.95
LRRC28-210ENST00000558879 SURF6O75683 361 aaKnown RBP20.95■□□□□ 0.94
LRRC28-210ENST00000558879 UQCRFS1P1P0C7P4 283 aa20.95■□□□□ 0.94
LRRC28-210ENST00000558879 ERICH6Q7L0X2 663 aa20.95■□□□□ 0.94
LRRC28-210ENST00000558879 DBNDD2Q9BQY9 259 aa20.95■□□□□ 0.94
LRRC28-210ENST00000558879 ZNF112Q9UJU3 913 aa20.95■□□□□ 0.94
LRRC28-210ENST00000558879 MGAMO43451 1857 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 ENTPD3O75355 529 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 WDHD1O75717 1129 aaPredicted RBP20.94■□□□□ 0.94
LRRC28-210ENST00000558879 BTDP43251 543 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 GORABQ5T7V8 394 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 BRI3BPQ8WY22 251 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 ZKSCAN4Q969J2 545 aaPredicted RBP20.94■□□□□ 0.94
LRRC28-210ENST00000558879 NSUN4Q96CB9 384 aaKnown RBP20.94■□□□□ 0.94
LRRC28-210ENST00000558879 OTUD5Q96G74 571 aa20.94■□□□□ 0.94
LRRC28-210ENST00000558879 DDX60LQ5H9U9 1706 aaKnown RBP20.93■□□□□ 0.94
LRRC28-210ENST00000558879 LOC285556D6RIA3 1793 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 GPR75-ASB3A0A0A6YYF3 556 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 CCDC85CA6NKD9 419 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 FKTNO75072 461 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 MS4A1P11836 297 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 RGS3P49796 1198 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 RHBDL3P58872 404 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 OS9Q13438 667 aaPredicted RBP20.93■□□□□ 0.94
LRRC28-210ENST00000558879 ERO1BQ86YB8 467 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 ZFPM1Q8IX07 1006 aa20.93■□□□□ 0.94
LRRC28-210ENST00000558879 ZNF512BQ96KM6 892 aaPredicted RBP20.93■□□□□ 0.94
LRRC28-210ENST00000558879 DDX4Q9NQI0 724 aaKnown RBP20.93■□□□□ 0.94
LRRC28-210ENST00000558879 INPP5BP32019 993 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 GTF2A2P52657 109 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 CRHR2Q13324 411 aa20.92■□□□□ 0.94
LRRC28-210ENST00000558879 PKN2Q16513 984 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms