RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 CACNB3P54284 484 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 FAM83AQ86UY5 434 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 TDRD7Q8NHU6 1098 aaKnown RBP13.3□□□□□ -0.28
TRAV33-201ENST00000557514 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 HOOK2Q96ED9 719 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 GUCD1Q96NT3 240 aa13.3□□□□□ -0.28
TRAV33-201ENST00000557514 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
TRAV33-201ENST00000557514 GCKRQ14397 625 aa13.29□□□□□ -0.28
TRAV33-201ENST00000557514 ANKLE1Q8NAG6 615 aa13.29□□□□□ -0.28
TRAV33-201ENST00000557514 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
TRAV33-201ENST00000557514 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
TRAV33-201ENST00000557514 CYP2C8P10632 490 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 INPP5BP32019 993 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 HDLBPQ00341 1268 aaKnown RBP13.28□□□□□ -0.28
TRAV33-201ENST00000557514 FKBP1CQ5VVH2 108 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 DCAF15Q66K64 600 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
TRAV33-201ENST00000557514 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 CHMP4AQ9BY43 222 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
TRAV33-201ENST00000557514 MYH3P11055 1940 aa13.27□□□□□ -0.28
TRAV33-201ENST00000557514 SYN1P17600 705 aa13.27□□□□□ -0.29
TRAV33-201ENST00000557514 GRIK5Q16478 980 aa13.27□□□□□ -0.29
TRAV33-201ENST00000557514 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAV33-201ENST00000557514 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
TRAV33-201ENST00000557514 GNAI1P63096 354 aa13.26□□□□□ -0.29
TRAV33-201ENST00000557514 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
TRAV33-201ENST00000557514 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
TRAV33-201ENST00000557514 UBE2OQ9C0C9 1292 aaKnown RBP13.26□□□□□ -0.29
TRAV33-201ENST00000557514 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
TRAV33-201ENST00000557514 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
TRAV33-201ENST00000557514 ZNF112Q9UJU3 913 aa13.26□□□□□ -0.29
TRAV33-201ENST00000557514 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
TRAV33-201ENST00000557514 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
TRAV33-201ENST00000557514 GYG1P46976 350 aa13.25□□□□□ -0.29
TRAV33-201ENST00000557514 APOBEC3HQ6NTF7 200 aaKnown RBP13.25□□□□□ -0.29
TRAV33-201ENST00000557514 TEKT1Q969V4 418 aa13.25□□□□□ -0.29
TRAV33-201ENST00000557514 FAM84BQ96KN1 310 aaPredicted RBP13.25□□□□□ -0.29
TRAV33-201ENST00000557514 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
TRAV33-201ENST00000557514 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
TRAV33-201ENST00000557514 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 CXCL11O14625 94 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 FOXO4P98177 505 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 MIGA2Q7L4E1 593 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
TRAV33-201ENST00000557514 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
TRAV33-201ENST00000557514 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
TRAV33-201ENST00000557514 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
TRAV33-201ENST00000557514 G2E3Q7L622 706 aa13.23□□□□□ -0.29
TRAV33-201ENST00000557514 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
TRAV33-201ENST00000557514 LINS1Q8NG48 757 aa13.23□□□□□ -0.29
TRAV33-201ENST00000557514 C11orf49Q9H6J7 331 aa13.23□□□□□ -0.29
TRAV33-201ENST00000557514 SLC45A1Q9Y2W3 748 aa13.23□□□□□ -0.29
TRAV33-201ENST00000557514 PFASO15067 1338 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 HMGCRP04035 888 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 RALBP1Q15311 655 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 TBC1D22AQ8WUA7 517 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 MRIQ9BWK5 157 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
TRAV33-201ENST00000557514 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 PLIN1O60240 522 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
TRAV33-201ENST00000557514 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
TRAV33-201ENST00000557514 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 OGDHLQ9ULD0 1010 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
TRAV33-201ENST00000557514 MAST3O60307 1309 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 FLIIQ13045 1269 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 WDR43Q15061 677 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRAV33-201ENST00000557514 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
TRAV33-201ENST00000557514 FAM151AQ8WW52 585 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 COA7Q96BR5 231 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 FAM161BQ96MY7 647 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 SUGT1Q9Y2Z0 365 aa13.2□□□□□ -0.3
TRAV33-201ENST00000557514 COL6A1P12109 1028 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 COL9A1P20849 921 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
TRAV33-201ENST00000557514 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 ZNF697Q5TEC3 545 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
TRAV33-201ENST00000557514 MAFAQ8NHW3 353 aaPredicted RBP13.19□□□□□ -0.3
TRAV33-201ENST00000557514 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
TRAV33-201ENST00000557514 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
TRAV33-201ENST00000557514 TRIM32Q13049 653 aa13.18□□□□□ -0.3
TRAV33-201ENST00000557514 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
TRAV33-201ENST00000557514 SCYL3Q8IZE3 742 aa13.18□□□□□ -0.3
TRAV33-201ENST00000557514 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
TRAV33-201ENST00000557514 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms